PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA50675.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | bZIP | ||||||||
Protein Properties | Length: 281aa MW: 30958.9 Da PI: 8.0876 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 51.7 | 1.9e-16 | 112 | 163 | 4 | 55 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 lkr rrk +NRe+ArrsR+RK+a ++ Le+ v++L +eN +L k+l e +++ PKA50675.1 112 LKRMRRKVSNRESARRSRRRKQAHLADLEQQVDQLRGENASLYKQLTEANQQ 163 8*****************************************9666665554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 281 aa Download sequence |
MTSIPSSSIS VDTSLSLPEM KSRIIIRMPQ VVLLVVHWQK GKYGLRALFL CFPASVLQLN 60 PNPSTGVQLP SLKPKSIENQ TLGGSSGSDQ SDEESFETEA GPCQQSTDTI NLKRMRRKVS 120 NRESARRSRR RKQAHLADLE QQVDQLRGEN ASLYKQLTEA NQQFTDSVTD NRILKSDVEA 180 LRVKVKMAEN MVARGSLTCS LDHLLQSPIS SSHLLGSLPN FDLQTKAASY LDAPLAGLAN 240 NTGDAAAEEV ETKNGDIRTS VHNLQNRISD DIANFSTQIW P |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 116 | 132 | RRKVSNRESARRSRRRK |
2 | 126 | 133 | RRSRRRKQ |
3 | 128 | 133 | SRRRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24800.1 | 1e-34 | bZIP family protein |