PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI18403.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ZF-HD
Protein Properties Length: 209aa    MW: 22888.5 Da    PI: 8.2576
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI18403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer98.26e-311368359
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                 +vrY+eC+kNhA+s+GghavDGC+Ef+++ geegt +a+ CaAC+CHRnFHR+e + 
   MCI18403.1 13 TVRYRECQKNHAVSIGGHAVDGCCEFLAA-GEEGTLEAVICAACNCHRNFHRKEIDG 68
                 79**************************9.999********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
ATGGGRKNGP TGTVRYRECQ KNHAVSIGGH AVDGCCEFLA AGEEGTLEAV ICAACNCHRN  60
FHRKEIDGEI ISHNQQSRSS HHVHAQYHHH HQHHQVSPYY HRAALPPPPG YHHMVTPPPV  120
SHHRPLALPP AASSGGFSRE DDDVSIPSSS GGGGGGSGMK KRFRTKFTPE QKEKMLAFAD  180
QIGWRIQKED EGAIEQFCAE NCIKRNVLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.12e-48ZF-HD family protein