PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY58982.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WOX

Protein Properties

Length: 352aa MW: 39870.1 Da PI: 6.9169

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY58982.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.9	1.3e-21	73	132	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Le+l+++ +r+psa+++++++++l +++ ++V++WFqN++a+e++ GAY58982.1 73 SRWNPTPEQLRTLEDLYRRgTRTPSADQIQHITAQLrrfgKIEGKNVFYWFQNHKARERQ 132 7***************99************************************97 PP
2	Wus_type_Homeobox	114.7	4.7e-37	72	134	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Le+ly++G+rtP++++iq+ita+L+++Gkie+kNVfyWFQN+kaRerqk+ GAY58982.1 72 SSRWNPTPEQLRTLEDLYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKR 134 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MWMMGYNDSG DSFNGRKLRP LIPRPLPTTT AINNNPSRIH GADFFGLNHH LGSHFGEQNK 60 REFSSTPPVV VSSRWNPTPE QLRTLEDLYR RGTRTPSADQ IQHITAQLRR FGKIEGKNVF 120 YWFQNHKARE RQKRRRQMES SPADHHHHNN NNNNLDIEIF KESAASKTGF EIEQTKNWAA 180 PTNCSTLAEE SVSAQRSTKV ATAEYNRQGG WVQFDEAAVG EIQQQRQCFV ERNATWQMMQ 240 YCSCPHQTAP TPTAMDQIQL IKGAHDLSIF ISPYKENGHG FNNCLNHNIV NDEEDHGCGE 300 SQTLQLFPLR NGGSSDDGID DNLGKATDVS VAAIDANNSN PCQFFEFLPL KN

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MWMMGYNDSG DSFNGRKLRP LIPRPLPTTT AINNNPSRIH GADFFGLNHH LGSHFGEQNK  60
REFSSTPPVV VSSRWNPTPE QLRTLEDLYR RGTRTPSADQ IQHITAQLRR FGKIEGKNVF  120
YWFQNHKARE RQKRRRQMES SPADHHHHNN NNNNLDIEIF KESAASKTGF EIEQTKNWAA  180
PTNCSTLAEE SVSAQRSTKV ATAEYNRQGG WVQFDEAAVG EIQQQRQCFV ERNATWQMMQ  240
YCSCPHQTAP TPTAMDQIQL IKGAHDLSIF ISPYKENGHG FNNCLNHNIV NDEEDHGCGE  300
SQTLQLFPLR NGGSSDDGID DNLGKATDVS VAAIDANNSN PCQFFEFLPL KN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	3e-56	WOX family protein