PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY57806.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family WOX
Protein Properties Length: 291aa    MW: 31783.5 Da    PI: 7.1471
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY57806.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.55.5e-193191256
                T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
    Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                ++R+t+t++q+++L+el+++   r p+ae++++++++l    +++ ++V++WFqN +a+e+
  GAY57806.1 31 CPRWTPTTDQIRILKELYYNngVRSPTAEQIQKISARLrqygKIEGKNVFYWFQNYKARER 91
                58****************98678************************************98 PP
2Wus_type_Homeobox107.39.6e-353094265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       +++RWtPt++Qi+iL+ely+ +G+r+P++e+iq+i+a+L++yGkie+kNVfyWFQN kaRer k+
         GAY57806.1 30 TCPRWTPTTDQIRILKELYYnNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARERLKK 94
                       579***************9779****************************************885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MEPQQQQNQH QGNGACGGSG KGNNCHCRPT CPRWTPTTDQ IRILKELYYN NGVRSPTAEQ  60
IQKISARLRQ YGKIEGKNVF YWFQNYKARE RLKKKIEGSS TSAADNLPMH QRPAAATNWK  120
PEDFANKSRS QSITSAGVSA TLPSYSVYTG GQMGDHGYGP VTMEKNFRDC SISSTGSSVV  180
GGSRSQNYGW VGIDPHTSSY IFFGQKNSAD GNQGNDKEDE EEEENGHPGI ETLPLFPMHG  240
EDSINNYCNS KPNSSSYYSG WYGSNDGSST SSSASLELSL NSYTSGSSGS I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-35WOX family protein