PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62039078-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 269aa    MW: 30372.8 Da    PI: 6.8662
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62039078-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding612.6e-191762147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W++eEd+ll ++v+++G ++W+ I++ +  gR++k+c++rw + 
   AUR62039078-RA 17 KGPWSPEEDQLLRKLVEKHGARNWSVISKSIS-GRSGKSCRLRWCNQ 62
                     79******************************.***********985 PP
2Myb_DNA-binding54.72.4e-1771113347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++++eEd+++v+a++++G++ W+tI+r ++ gRt++ +k++w++ 
   AUR62039078-RA  71 AFSAEEDDIIVRAHAKFGNK-WATISRLLN-GRTDNAIKNHWNST 113
                      79******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MDNHLQTSSS MAADRIKGPW SPEEDQLLRK LVEKHGARNW SVISKSISGR SGKSCRLRWC  60
NQLSPEVEHR AFSAEEDDII VRAHAKFGNK WATISRLLNG RTDNAIKNHW NSTLKRKFSS  120
IVAGDEVYRP EKRPEISHSS PPLSPSESDV SDSGVGFRSA VAEEKEKVEN DPLTALTLSL  180
PGVEEQHQHQ QQQQPTSRIE ATTQEVNQKN ESVKETMSFG PELMNVMQEM IRKEVRNYMA  240
EAEKSGVYFD GDIARNAVVE RFYNGHFH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.12e-61MYB family protein