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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62027278-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MYB | ||||||||
Protein Properties | Length: 307aa MW: 34273.1 Da PI: 4.5748 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.7 | 8.3e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ + G +W+++++ g++R++k+c++rw +yl AUR62027278-RA 14 KGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.1 | 3.2e-16 | 71 | 111 | 5 | 47 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + E++l +d++++lG++ W++Ia++++ gRt++++k++w+++ AUR62027278-RA 71 SDAEEQLVIDLHARLGNR-WSKIAARLP-GRTDNEIKNHWNTH 111 778***************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MGRQPCCDKL GVKKGPWTAE EDKKLINFIL TNGQCCWRAV PKLAGLRRCG KSCRLRWTNY 60 LRPDLKRGLL SDAEEQLVID LHARLGNRWS KIAARLPGRT DNEIKNHWNT HIKKKLIKMG 120 IDPVTHEPLN KDQSPNNQII PNQSSSSSNN NNNSDISTAE SLNQTQSSSL ETANSDPANS 180 MSVINSMSED ITNNNSPPTE NSSSVNNDQP NTSSLIEGIS IDNALMNYLW DDNDVTPLEL 240 PYSYNSDQTC LSSNNVANTI TLPTWEDNCS WLFDCQDFGI QDFGLDCFND IEIMNTMDVL 300 EMGNNQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22680.1 | 1e-92 | MYB family protein |