PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc04894.1.g00010.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 344aa    MW: 38280.4 Da    PI: 11.6828
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc04894.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.41.2e-11226270549
                                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                                   ++ +r  +NRe+ArrsR+RK++++eeL  +v+ L+aeN + + ++
  Zpz_sc04894.1.g00010.1.am.mk 226 RKRKRTLSNRESARRSRARKQQRLEELVAEVARLQAENARAQARI 270
                                   6778999*******************************8766665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.0E-11222279No hitNo description
SMARTSM003389.7E-16222286IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.22224287IPR004827Basic-leucine zipper domain
PfamPF001707.6E-8225267IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.24E-9226277No hitNo description
PROSITE patternPS000360229244IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
LVGPTGSWAG LGYLRPITSG AAHFAQPIAR RGGPSRTSPS DHRDHAVRHC TRSSASWLFP  60
HTERPTPTRY LRQLRSSFRE LNFTRSDPQL IQLNGTVWSS ATDRHRSADL RRVLNVQVVG  120
GVRSDASVIC VEEIYDPPVL RVQIQAAAAA GPHVHPPVSL TSARRRPMKL RVLRRRRSHS  180
FSVAFLYWFY KEKIDLAMSS SRRSSSPDSH KDGSTGGVAA STAAERKRKR TLSNRESARR  240
SRARKQQRLE ELVAEVARLQ AENARAQARI AAFDRELGKV DGDNAVLRAR HGELAGRLEA  300
LTGVLEVLQM AGATVDIPEI PDPMLRPWQP PFQMQPVAAD GFQY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1238245RRSRARKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc04894.1.g00010.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP188635100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.15e-18basic region/leucine zipper motif 53