PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc04460.1.g00010.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 252aa    MW: 27079.2 Da    PI: 4.5621
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc04460.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.71e-1691140355
                           AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   + GVr ++ +g+++AeIrd    + k +r++lg+f+t+e Aa a+++a+ + +g
  Zpz_sc04460.1.g00010.1.am.mk  91 FIGVRKRP-WGKFAAEIRDsT--R-KGARVWLGTFDTPEAAALAYDQAAFSARG 140
                                   57******.**********32..2.24***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003804.3E-3090154IPR001471AP2/ERF domain
PROSITE profilePS5103221.64190148IPR001471AP2/ERF domain
PRINTSPR003671.8E-891102IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.9E-2891149IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-2191150IPR016177DNA-binding domain
CDDcd000183.89E-1491125No hitNo description
PfamPF008472.3E-1291140IPR001471AP2/ERF domain
PRINTSPR003671.8E-8114130IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MEQEKHSAPA AAEAASDAPL PFDTTDIDDD TVLQLEAILL GTDTDSTVPC SDMSNSSELE  60
DGRGSSAATN DYLQRQHPGY SQVPKQPPAA FIGVRKRPWG KFAAEIRDST RKGARVWLGT  120
FDTPEAAALA YDQAAFSARG AAAVLNFPLE CVRESLAAME LTAGSSPVLA LKRRHSKRTR  180
RRKVPPVSDG SKDPTPPACR RSDESAVLGS TVEVTQQQAT VPCPFDCSVN VVELEELGAD  240
YLDELLWMSS GI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-25911511575Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtMay act as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:11950980}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc04460.1.g00010.1.am.mk
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Weakly induced by Pseudomonas syringae tomato (avirulent avrRpt2 strain), but also by mock inoculation. {ECO:0000269|PubMed:11950980}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7276832e-86KJ727683.1 Zea mays clone pUT5611 AP2-EREBP transcription factor (EREB59) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004979115.15e-53ethylene-responsive transcription factor ERF094
SwissprotQ8VYM01e-39ERF93_ARATH; Ethylene-responsive transcription factor 15
TrEMBLA0A3L6Q3131e-53A0A3L6Q313_PANMI; Uncharacterized protein
STRINGPavir.Hb01336.1.p1e-53(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2868035
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31230.16e-36ethylene-responsive element binding factor 15
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Zhang H, et al.
    Arabidopsis AtERF15 positively regulates immunity against Pseudomonas syringae pv. tomato DC3000 and Botrytis cinerea.
    Front Plant Sci, 2015. 6: p. 686
    [PMID:26388886]