PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03460.1.g00040.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 567aa    MW: 60945.1 Da    PI: 10.5793
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03460.1.g00040.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM99.45.3e-311392631128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkya.tgkrknratks 80 
                                   lp+GfrFhPtdeel+ +yL++k+ + +l++ ++i+ +d+ +++PwdL       ++e + F+  +++   +   ++ra+ +
  Zpz_sc03460.1.g00040.1.am.mk 139 LPVGFRFHPTDEELLLHYLRRKALACSLPA-DIIPVADLARLHPWDLV-PPGDADEERFLFHLPATRCWrRAGGARRAAGT 217
                                   79****************************.99**************5.2334566777666665555516778888**** PP

                           NAM  81 gyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   g+W+a+gk k v+s   g+ vg k+tLvf    ++ g++tdW+mheyrl
  Zpz_sc03460.1.g00040.1.am.mk 218 GVWRASGKAKLVVSPrCGRPVGEKRTLVFC---HRGGKRTDWLMHEYRL 263
                                   ************99878999*********9...677889********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.45E-40136303IPR003441NAC domain
PROSITE profilePS5100539.762139304IPR003441NAC domain
PfamPF023652.8E-19140263IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 567 aa     Download sequence    Send to blast
MNRGMDTGAA VRVHVLCRAG STVHQGRRHG MERDATHATP SVLFLYPARA PAVPSSSLHA  60
TDATAEACAS DSERHCTALV VLPLPQSTES SAAITDVRTS SPSCMLGGAG HRASRRCVAM  120
EARQAAGAAA GGGGALAGLP VGFRFHPTDE ELLLHYLRRK ALACSLPADI IPVADLARLH  180
PWDLVPPGDA DEERFLFHLP ATRCWRRAGG ARRAAGTGVW RASGKAKLVV SPRCGRPVGE  240
KRTLVFCHRG GKRTDWLMHE YRLLPAGLLL PHNPSSAAPH VMNCHGDGAA AGAEDWVVCR  300
IFKRTKPGHG GRGGEEAEEI PSFLFTKHLL PVPTARCCPP KHKNKGIVVE AKGEQKGDDD  360
KVFDAVTDWR EAVVASDRYL SSPRGSSLLL LLPPGGRRSI GGMGISFRVA GLIRQGSQSQ  420
PYSRGQQQHR TCSHAGAGSR SLCRRSRGNR RLPRIQDRGV RSEGTDSGSG DRHQSFGGFF  480
PDSPRLDVSS PRLPCSRRRR NSKQSEPREG NGLPCAAWPG PEGTAPCVHL IHSPRSWPRG  540
DLNRGTGLEW LGRSDGRAPH ATGWLVP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-2313530411168Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc03460.1.g00040.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP82333047
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-25NAC domain containing protein 83