PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03413.1.g00050.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 161aa    MW: 15967 Da    PI: 8.7726
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03413.1.g00050.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.91.9e-162876355
                           AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  ykGVr ++ +g+Wv+e+r p   g ++r++lg++ tae Aa+a++aa ++l+g
  Zpz_sc03413.1.g00050.1.am.mk 28 YKGVRMRS-WGSWVSEVRAP---GAKARIWLGSHSTAEAAARAYDAALLCLRG 76
                                  9****998.*******9998...445*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.3E-262786IPR001471AP2/ERF domain
SMARTSM003803.3E-282792IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-162787IPR016177DNA-binding domain
PROSITE profilePS5103220.892786IPR001471AP2/ERF domain
CDDcd000181.82E-142888No hitNo description
PRINTSPR003672.5E-82839IPR001471AP2/ERF domain
PfamPF008472.4E-102876IPR001471AP2/ERF domain
PRINTSPR003672.5E-85066IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MVKTAALCND TAAPAPAAAK RNSGKRAYKG VRMRSWGSWV SEVRAPGAKA RIWLGSHSTA  60
EAAARAYDAA LLCLRGSAAA ADLNFPVQLP VDGLPAATAM SPKSIQRVAA AAAAAGATAF  120
ASRADDVDVP CCSGDDSAPA CSSGGGTEAL SVSSLGSTVT S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-1228911577Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in the regulation of plant development and tolerance to abiotic stresses (PubMed:21069430). Involved in salt and osmotic stress response pathways. May be regulated by the stress-related genes RD29A, RD22, DREB1A or P5CS during stress response (PubMed:27137403). Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:21069430, ECO:0000269|PubMed:27137403}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc03413.1.g00050.1.am.mk
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by jasmonate (JA) and ethylene. Down-regulated by freezing and heat stresses. {ECO:0000269|PubMed:21069430}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025810729.12e-40ethylene-responsive transcription factor ERF014-like
RefseqXP_025810730.12e-40ethylene-responsive transcription factor ERF014-like
RefseqXP_025810731.12e-40ethylene-responsive transcription factor ERF014-like
SwissprotQ9SFE49e-34ERF12_ARATH; Ethylene-responsive transcription factor ERF012
TrEMBLA0A1E5WA757e-41A0A1E5WA75_9POAL; Uncharacterized protein
STRINGPavir.J26231.1.p2e-37(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31973469
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.12e-24ERF family protein
Publications ? help Back to Top
  1. Kazama D,Kurusu T,Mitsuda N,Ohme-Takagi M,Tada Y
    Involvement of elevated proline accumulation in enhanced osmotic stress tolerance in Arabidopsis conferred by chimeric repressor gene silencing technology.
    Plant Signal Behav, 2014. 9(3): p. e28211
    [PMID:24614501]
  2. Kazama D, et al.
    Identification of Chimeric Repressors that Confer Salt and Osmotic Stress Tolerance in Arabidopsis.
    Plants (Basel), 2013. 2(4): p. 769-85
    [PMID:27137403]