PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03133.1.g00070.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 380aa    MW: 41381.6 Da    PI: 8.5719
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03133.1.g00070.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY67.71.8e-21211272259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-S..SSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversa..edpkvveitYegeHnhe 59 
                                   +Dg+ WrKYGqKe++g  +pr YYrC+++  gC+++++v+r++  e+p + ei Y g+H+++
  Zpz_sc03133.1.g00070.1.am.mk 211 EDGFIWRKYGQKEINGRMHPRLYYRCAYRhqGCTATRRVQRTReeEEPAAYEIAYYGQHTCR 272
                                   7**************************9988*********97611568899********995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081117.282205272IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.8E-23205272IPR003657WRKY domain
SuperFamilySSF1182906.8E-21206272IPR003657WRKY domain
SMARTSM007746.7E-28210273IPR003657WRKY domain
PfamPF031062.1E-23211272IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MRGTSPDSDG IDRIPGPGTL VPIHRPRRLA NNQATREERV AASSGAARQE RKLVARRVVV  60
LRRVFPSLSL PIIQRTINSR PPPHSKQASE QSHAQRSAAV VPSRGRSMPL ATPEAVVLEL  120
MTMGQQSVAH LGDLFRSACP ASPHQELAAE ILRCCGRVIA ALTGNGGKKR KAVEHDNTAA  180
AAAWSPPSTP PRKRARVGAE ALGLVKSGTT EDGFIWRKYG QKEINGRMHP RLYYRCAYRH  240
QGCTATRRVQ RTREEEEPAA YEIAYYGQHT CRGAAASRQL PPAVVDFGSN AWGCGTAPAA  300
SELHLRSCWD DGEMSSPASE AAPFDEAQTV HEWRDAAAAP VEVPSATLFH ASDPEMEFLD  360
GGFDWESLIN DVPLDFGAYQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-16211272969OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc03133.1.g00070.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004970388.18e-89probable WRKY transcription factor 38
TrEMBLK3XKH82e-87K3XKH8_SETIT; Uncharacterized protein
STRINGSi002401m3e-88(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP83223147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.13e-14WRKY DNA-binding protein 46