PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc02829.1.g00100.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 304aa MW: 31720.2 Da PI: 8.6333 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 39.8 | 1.2e-12 | 132 | 175 | 9 | 55 |
AP2 9 dkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++grW++eIr p++ r++ ++g+f t+eeAa a++aa +++g Zpz_sc02829.1.g00100.1.am.mk 132 RRRQGRWASEIRMPRT---RAKLWIGTFATPEEAALAYDAAVFCFYG 175 678**********965...4*********************999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 17.372 | 124 | 187 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 4.39E-20 | 130 | 189 | No hit | No description |
SuperFamily | SSF54171 | 1.05E-12 | 132 | 187 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 3.6E-7 | 132 | 175 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 5.9E-18 | 132 | 193 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 4.5E-19 | 132 | 188 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 304 aa Download sequence Send to blast |
MRRLAPPPQY HALSSHLSAS GEIFATASPS TTPLCCLPLP PFKLSPLASS PLHSHTASLS 60 SFDLLIVRGS CLVPFLLVAS VVSMAGAAAS RATGVAGMGN GRSTAPQGNN NGALSGAGGG 120 GGPKNLGWLG ARRRQGRWAS EIRMPRTRAK LWIGTFATPE EAALAYDAAV FCFYGARVPD 180 SRRLNFPTAP RPNISENMRV RLTVSNIKAI AEHYARTLAV YLVPPPPPVL LPVPAPAPAV 240 PAPMMVNEAP VEATAASAAG AASATTNHGN VNAMDGDSAA ATVEDYFLNF NPEEFDFDHL 300 MADI |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc02829.1.g00100.1.am.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002444750.1 | 1e-37 | ethylene-responsive transcription factor ERF015 | ||||
TrEMBL | C5YIM2 | 2e-36 | C5YIM2_SORBI; Uncharacterized protein | ||||
STRING | Sb07g027250.1 | 4e-37 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5444 | 25 | 55 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31060.1 | 2e-17 | ERF family protein |