PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc02829.1.g00080.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 261aa MW: 27741.5 Da PI: 7.1934 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 42.2 | 2e-13 | 47 | 91 | 7 | 55 |
AP2 7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 r+++ +grW+Ae+r+p++ r r ++g+f t++eAa a++aa +++g Zpz_sc02829.1.g00080.1.sm.mk 47 RRRE-WGRWAAELRVPNT---RERLWIGTFATPKEAAHAYDAAVFCFYG 91 5555.**********944...5*********************998875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 20.112 | 42 | 103 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.0E-19 | 42 | 109 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.33E-15 | 43 | 103 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 6.5E-6 | 43 | 54 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.0E-21 | 44 | 104 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.00E-19 | 44 | 105 | No hit | No description |
Pfam | PF00847 | 1.2E-7 | 47 | 89 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.5E-6 | 65 | 81 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence Send to blast |
MATAAAASSG SSGAASVGKK ARRRRGGRRS SATATAMPKN LGWVGARRRE WGRWAAELRV 60 PNTRERLWIG TFATPKEAAH AYDAAVFCFY GDNIPRIRRL NFPTAPRPDV PEDVRAKLTV 120 ANIKAIAEKY ARDLADYIPP PPVFLEAAPQ VVEAAPAAVD ASIGDVRAKL TVANIKAIAE 180 KYARDLADYI PPPPVFLEAA PQVVEAAPAA VDASIGVGAA PTADCGSVDE TAVDMSIADC 240 LLSFNDGPVE FDDILNFENI K |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc02829.1.g00080.1.sm.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008666485.1 | 6e-42 | ethylene-responsive transcription factor ERF015 | ||||
TrEMBL | A0A060D144 | 1e-40 | A0A060D144_MAIZE; AP2-EREBP transcription factor (Fragment) | ||||
TrEMBL | A0A317Y094 | 1e-40 | A0A317Y094_MAIZE; Ethylene-responsive transcription factor ERF015 | ||||
STRING | GRMZM2G033656_P01 | 2e-41 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5444 | 25 | 55 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31060.1 | 2e-13 | ERF family protein |