PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02765.1.g00100.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 209aa    MW: 23219 Da    PI: 9.3946
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02765.1.g00100.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM46.98.5e-15121475128
                           NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyat.gkrk 74 
                                   f F P+d  lv + L++k+ g +++ +  + + d+++v P++L +          + +++ ++ yfFs+++  +++ +k++
  Zpz_sc02765.1.g00100.1.am.mk  12 FMFTPSDRRLV-DILRAKIGGGDFPNAAYFVDDDVCSVRPEELVRkhskparvrsREAGDGRQFYFFSPESFVSTRtKKQR 91 
                                   89*********.88*********999888**************73367777554322225568899999876655313333 PP

                           NAM  75 nra....tksgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                                   +r+      +  W+  g+ k v     ++ g  + + f+ k   ++  k  W+m ey+l
  Zpz_sc02765.1.g00100.1.am.mk  92 KRTidrtSGNECWHGEGSGKLVDG---TNDGYMTKFSFHiKIAGETVAKPGWLMTEYSL 147
                                   343232133567*****9877754...567888889999444667777*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.1558163IPR003441NAC domain
SuperFamilySSF1019411.83E-2012163IPR003441NAC domain
PfamPF023655.6E-1112147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MDAFPAAEDD SFMFTPSDRR LVDILRAKIG GGDFPNAAYF VDDDVCSVRP EELVRKHSKP  60
ARVRSREAGD GRQFYFFSPE SFVSTRTKKQ RKRTIDRTSG NECWHGEGSG KLVDGTNDGY  120
MTKFSFHIKI AGETVAKPGW LMTEYSLKGT GAGGWVLCKI YKSPRGPGRS KAPSSLENKR  180
KAADDLEDAR PSTKERRQDQ IDANGALEG
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02765.1.g00100.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62801545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52890.18e-07NAC domain containing protein 19