PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02595.1.g00120.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 572aa    MW: 60452.9 Da    PI: 8.3241
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02595.1.g00120.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.67.9e-31331389259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  Zpz_sc02595.1.g00120.1.am.mk 331 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRQDPNMLVITYTSEHNHP 389
                                   699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081133.029325391IPR003657WRKY domain
Gene3DG3DSA:2.20.25.808.9E-31328391IPR003657WRKY domain
SuperFamilySSF1182904.05E-26329391IPR003657WRKY domain
SMARTSM007741.0E-37330390IPR003657WRKY domain
PfamPF031061.0E-25332389IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 572 aa     Download sequence    Send to blast
MHDFLPRATS ARRGHAALRM EVAHRPASRP HLASRARPVP GGGHGIHPSI RPSVNRPSAA  60
ASLIGSERII ERRAVVAACT HYRAPVDRQR CPSQRDIAMC DSYFLQRMEG DQAGGGDLTD  120
VVRAGGVVPG NAEVPSTAAE WQLQGEPMFY PPPPSSSDGC AGSTGASVFG DPFSGLGDPF  180
SSDFSSGADF LDAMPEAMAK VGFDTAVGGG GSGCGGGGAQ MLDMSRKAPL LPRGVQMPPT  240
VGLLGPRVLP SPLSPRAIRP YPPMGGDMAK LGITAGQIAG CAIDAAVVGT QMSSPRAAGG  300
IKRRKNQARK VVCIPAPTAA SGRPTGEVLP SDLWAWRKYG QKPIKGSPYP RGYYRCSSSK  360
GCSARKQVER SRQDPNMLVI TYTSEHNHPW PTQRNALAGS TRNHHGKNGS GSSGSKSSQN  420
EKQKLPNVKE ESKDQATTAS TINTATSTSP VPAVKEEALP GSEALGRTMD ATGAADHNNL  480
TLMDHVFISE SYKPMIPEAG QPDDFFFDLA ELESEPMSLI FSKDRIEENP AGGDDDRGKD  540
KAIIKDLDPF EMLDWSNTSS AGSSFEQGNK IG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B7e-24305392280Disease resistance protein RRS1
5w3x_D7e-24305392280Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00171DAPTransfer from AT1G30650Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02595.1.g00120.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0731002e-91AK073100.1 Oryza sativa Japonica Group cDNA clone:J033016K09, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025825027.10.0probable WRKY transcription factor 35
TrEMBLA0A1E5VDC20.0A0A1E5VDC2_9POAL; Putative WRKY transcription factor 35
STRINGSi011735m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25923888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.12e-63WRKY DNA-binding protein 35