PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01843.1.g00020.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 952aa    MW: 100644 Da    PI: 9.4513
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01843.1.g00020.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-19736786155
                           AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                   ++++GVr+++ +g+++AeIrd +     r  r++lg+f+taeeAa+ ++ a+ +l+g
  Zpz_sc01843.1.g00020.1.am.mk 736 TKFRGVRRRP-WGKYAAEIRDpW-----RgVRVWLGTFDTAEEAARVYDSAAIQLRG 786
                                   69********.**********88.....55*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008476.0E-12736786IPR001471AP2/ERF domain
CDDcd000182.39E-28736793No hitNo description
SMARTSM003809.0E-34737800IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.0E-29737794IPR001471AP2/ERF domain
SuperFamilySSF541715.1E-21737794IPR016177DNA-binding domain
PROSITE profilePS5103223.196737794IPR001471AP2/ERF domain
PRINTSPR003671.6E-9738749IPR001471AP2/ERF domain
PRINTSPR003671.6E-9760776IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 952 aa     Download sequence    Send to blast
MVNTTTTECG LLVAEASTDW STVTVVETST TRRVLATMVE ASTNRKVLVM DVTENSTNRK  60
DEHYHAVNYS ACVQAWMESS LLLLHAAFRE WASKRQHEQG KDRGGGTEAG GSTRFVKAGC  120
CTDEQCHPYG LSSKLYTPTV HARGRRAKPL AAGCSACESE GACRTASCPN RQNFLSSDVS  180
PDPAHVYGVD GHRARDLPRR AHTGCSRAGK IHRCAVPSPS RGWQEEPAGR RYGDLTVPAG  240
RNRARMHATG ARRRSSYAPA GCPSERGEIS TGPVQALSTQ RRSDAGAPPD ALTGRLGGGA  300
LLPSGAFAPD RPPSRAAPPP SSRAPMAARG GGGGHHASRH DWLCAPLPNG WDPACAVRNP  360
SAICAARMQN LQRAVLLAKS QTRPRSAHPA GQGRLVEFTP PAPAMDSGNH SPTFVFRSPQ  420
KTYPNPQNHP IEPVAHQSPA STPHVAARLP SVLRSQGLLL VFLHATQLLP PRFGGSVSCS  480
SRSLRSISFR SDSSWYRSKY CSRRHLSPRS ESCFSQSSKT VKVPAGGAAA AAAAPAVAAS  540
VRTRQRRGRA RLYCLPFVSL LLCSSCSRSP AAFLFSFLKK VNRSSLLRPL LRSPAALACS  600
PAPLASLLPS FGLYSPADPQ SRTEGIHPSI TSLLVLAMSR SRTVRIFWDD PDVTDSSGDE  660
DAYGARKVGR LVRELPRVEA AAAAAAAAAA GGMLEQSSAG DGERGRRPAA GGLGGCSGGA  720
RRRLGSKGAG SVAPGTKFRG VRRRPWGKYA AEIRDPWRGV RVWLGTFDTA EEAARVYDSA  780
AIQLRGPNAT TNFSSAAAAD SGGSGGGHQD QVTAGYESGT ESSPAVSSPT SVLRKVPSLS  840
SLAEDKDESD AATGEPAAEG SLAALEELGE FVPFEDAPVY ASSSGFWDFE PDAAGFLYAE  900
PSSPETAWDV AAATTSASSG DASWPAPSVH QENDYFQDLR DLFPLNPLPA IF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-19725802480Ethylene-responsive transcription factor ERF096
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01843.1.g00020.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16903697
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11140.13e-23cytokinin response factor 1