PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01454.1.g00020.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 396aa    MW: 44428.9 Da    PI: 5.9097
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01454.1.g00020.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like63.15.4e-2072123355
                       G2-like   3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                   rl Wt eL e+F+ea+e L G ++A+P++i++ m+vk+Lt ++++SHLQk+R+
  Zpz_sc01454.1.g00020.1.sm.mk  72 RLIWTVELQENFLEAIEVL-GDKNAVPSRIVKQMNVKDLTAKQIASHLQKHRS 123
                                   99*****************.9******************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.75867126IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.6E-1968126IPR009057Homeodomain-like
SuperFamilySSF466891.63E-1471126IPR009057Homeodomain-like
TIGRFAMsTIGR015574.4E-1972124IPR006447Myb domain, plants
PfamPF002493.1E-675122IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    Send to blast
MYANDNEEAS SECMAVGACF HLPKPLTAGS FNMLRDTARQ HKSRRAAIKQ QHLKGHTNST  60
KRDRFHSKKL DRLIWTVELQ ENFLEAIEVL GDKNAVPSRI VKQMNVKDLT AKQIASHLQK  120
HRSRVKAYQR KFQQNASKKA VPKLIRSEHN DSTTVCITPK VAADIRELYP SRLWTNVKKI  180
RWEYEQPTKG KDVVRYEGSS SEGLETAGEI GHGVPFESSG SNSMLTSSLG QTEKNNLTET  240
AVTYPSDGCL HNDALLNDTN KSFSTQMYMA GPADDREELI SFWMSHMNPQ EPLNVDEAWN  300
ETLAWGTQPS LVNVIEPITQ ETIVEETLVL DPVMQSAQTQ EAAVGDAQVP DPVVQFVQTQ  360
EVAVGAAPLH DHVMQFAQDD VYWSLSPSLA DYDMLF
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01454.1.g00020.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP130171928
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44190.11e-12GOLDEN2-like 2