PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01388.1.g00120.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 127aa    MW: 14461.8 Da    PI: 8.8902
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01388.1.g00120.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.4e-201163156
                           AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                                  ++y+GVr+++ +g+++AeIrd s    +  r +lg+f+taeeAa+a+++ + +++g+
  Zpz_sc01388.1.g00120.1.am.mk 11 PKYRGVRRRP-WGKFAAEIRDSSR---HgVRMWLGTFDTAEEAARAYDRSAYAMRGA 63
                                  79********.**********432...25*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.01E-291172No hitNo description
PfamPF008472.8E-141162IPR001471AP2/ERF domain
SMARTSM003806.9E-341276IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-231271IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.3E-311271IPR001471AP2/ERF domain
PROSITE profilePS5103223.8411270IPR001471AP2/ERF domain
PRINTSPR003671.1E-111324IPR001471AP2/ERF domain
PRINTSPR003671.1E-113652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009789Biological Processpositive regulation of abscisic acid-activated signaling pathway
GO:0010186Biological Processpositive regulation of cellular defense response
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0090332Biological Processstomatal closure
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    Send to blast
MDGGGEGDPH PKYRGVRRRP WGKFAAEIRD SSRHGVRMWL GTFDTAEEAA RAYDRSAYAM  60
RGANAVLNFP EDAQVYAREQ RGSSSSSSSS RQQHQQPGRS SEVIEFEYLD DAVLQEMLRN  120
HDERKKK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-3511131114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00029PBMTransfer from AT5G43410Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01388.1.g00120.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0061621e-58AP006162.2 Oryza sativa Japonica Group genomic DNA, chromosome 9, BAC clone:B1331F11.
GenBankAP0149651e-58AP014965.1 Oryza sativa Japonica Group DNA, chromosome 9, cultivar: Nipponbare, complete sequence.
GenBankCP0126171e-58CP012617.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 9 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021307832.12e-54ethylene-responsive transcription factor ERF096-like
SwissprotQ9LSX01e-34ERF96_ARATH; Ethylene-responsive transcription factor ERF096
TrEMBLA0A1B6QB794e-53A0A1B6QB79_SORBI; Uncharacterized protein
STRINGSi032391m3e-51(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.18e-36ERF family protein
Publications ? help Back to Top
  1. Zander M,Thurow C,Gatz C
    TGA Transcription Factors Activate the Salicylic Acid-Suppressible Branch of the Ethylene-Induced Defense Program by Regulating ORA59 Expression.
    Plant Physiol., 2014. 165(4): p. 1671-1683
    [PMID:24989234]