PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01384.1.g00190.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 390aa    MW: 42165.6 Da    PI: 8.9933
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01384.1.g00190.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.2e-18169217153
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 
                                   ++++GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a+  +
  Zpz_sc01384.1.g00190.1.am.mk 169 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDEAAVLM 217
                                   59*******9.**********8.....334*********************9765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.30E-32169228No hitNo description
Gene3DG3DSA:3.30.730.101.6E-32170227IPR001471AP2/ERF domain
PfamPF008471.8E-11170214IPR001471AP2/ERF domain
SMARTSM003809.7E-39170233IPR001471AP2/ERF domain
SuperFamilySSF541716.47E-20170228IPR016177DNA-binding domain
PROSITE profilePS5103221.878170227IPR001471AP2/ERF domain
PRINTSPR003673.4E-10171182IPR001471AP2/ERF domain
PRINTSPR003673.4E-10193209IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MDLILGSLHG LTAQDSQPPP RPACTFHGRA ARAFTAKDPS EQLQQQKVPS AKNSLTHVSE  60
WSRALRSWFG SLRARLQPSS NIINEVAKGV GEGVYYQCPG SRGWLCHPLQ FTDSAADPTH  120
LLHFPSSCFP SPPHQDSSTV GPAFSVLPWR RICRPCPPAE QRISMVQSKK FRGVRQRHWG  180
SWVSEIRHPL LKRRVWLGTF ETAEEAARAY DEAAVLMSGR NAKTNFPVPR SATGELAPVP  240
AARDSRGGVG SSSAVGGSNT TNLSQILSAK LRKCCKTPSP SLTCLRLDPE KSHIGVWQKR  300
AGARADSSWV MTVELNKDAA AAATSSSEEP TLSYGAATTP TSTSTTTDSP PAMDDEERIA  360
LQMIEELLGR SGPVDHSHGM LLSGEGSLII
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-15167235270ATERF1
3gcc_A5e-15167235270ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPromotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis (PubMed:15070782, PubMed:15319479). Confers drought resistance (PubMed:15319479). Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15070782, ECO:0000269|PubMed:15319479}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01384.1.g00190.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004965944.11e-112ethylene-responsive transcription factor WIN1
SwissprotQ9XI334e-74WIN1_ARATH; Ethylene-responsive transcription factor WIN1
TrEMBLA0A368QYU51e-110A0A368QYU5_SETIT; Uncharacterized protein
TrEMBLK3Y2H01e-110K3Y2H0_SETIT; Uncharacterized protein
STRINGSi008394m1e-111(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37173876
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.12e-59ERF family protein
Publications ? help Back to Top
  1. Taketa S, et al.
    Barley grain with adhering hulls is controlled by an ERF family transcription factor gene regulating a lipid biosynthesis pathway.
    Proc. Natl. Acad. Sci. U.S.A., 2008. 105(10): p. 4062-7
    [PMID:18316719]
  2. Al-Abdallat AM,Al-Debei HS,Ayad JY,Hasan S
    Over-expression of SlSHN1 gene improves drought tolerance by increasing cuticular wax accumulation in tomato.
    Int J Mol Sci, 2014. 15(11): p. 19499-515
    [PMID:25350113]
  3. Djemal R,Khoudi H
    Isolation and molecular characterization of a novel WIN1/SHN1 ethylene-responsive transcription factor TdSHN1 from durum wheat (Triticum turgidum. L. subsp. durum).
    Protoplasma, 2015. 252(6): p. 1461-73
    [PMID:25687296]
  4. Sadler C, et al.
    Wax and cutin mutants of Arabidopsis: Quantitative characterization of the cuticular transport barrier in relation to chemical composition.
    Biochim. Biophys. Acta, 2016. 1861(9 Pt B): p. 1336-1344
    [PMID:26965486]
  5. Sajeevan RS, et al.
    Expression of Arabidopsis SHN1 in Indian Mulberry (Morus indica L.) Increases Leaf Surface Wax Content and Reduces Post-harvest Water Loss.
    Front Plant Sci, 2017. 8: p. 418
    [PMID:28421085]