PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc01354.1.g00180.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 97aa MW: 10747 Da PI: 4.4721 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 45.5 | 2.5e-14 | 14 | 95 | 2 | 80 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratks 80 ppG+ F+Ptdeel+ +yL ++ g++ + v +++ +++Pw+L + ++ ++ fF rd++ ++ +r++r Zpz_sc01354.1.g00180.1.am.mk 14 PPGLVFDPTDEELIGYYLLPRSLGEPEAFPGViVEDNTAANTQPWKLLRnhGLSDDDVPAAFFYVRDESRPNARRSRRCDGG 95 8*************************888788355558999******74123333444568888889999999999997554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.18E-15 | 9 | 96 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 19.236 | 13 | 97 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.0E-7 | 14 | 88 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 97 aa Download sequence Send to blast |
MVMSPAKFLG DDHPPGLVFD PTDEELIGYY LLPRSLGEPE AFPGVIVEDN TAANTQPWKL 60 LRNHGLSDDD VPAAFFYVRD ESRPNARRSR RCDGGGT |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc01354.1.g00180.1.am.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004954806.1 | 2e-17 | NAC domain-containing protein 48 | ||||
TrEMBL | A0A1E5VKK1 | 7e-22 | A0A1E5VKK1_9POAL; Uncharacterized protein | ||||
STRING | Pavir.Aa02111.1.p | 9e-21 | (Panicum virgatum) | ||||
STRING | Si019916m | 2e-20 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP8717 | 9 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03200.1 | 3e-10 | NAC domain containing protein 45 |