PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01263.1.g00170.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 590aa    MW: 65287.8 Da    PI: 11.3645
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01263.1.g00170.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.59.3e-52221511128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   lppGfrFhP+dee++++yL++kv ++++++ ++i e+di+k+ePw+Lp+k+k +ekewyf+s +  ky++g+r+nratk+g
  Zpz_sc01263.1.g00170.1.am.mk  22 LPPGFRFHPSDEEIITFYLRPKVINTRFTA-HAIGEADINKCEPWELPEKAKMGEKEWYFYSLKGLKYPSGSRANRATKAG 101
                                   79*************************999.88***************99999**************************** PP

                           NAM  82 yWkatgkdkevlskkgel...vglkktLvfykgrapkgektdWvmheyrl 128
                                   yWkatgkd+e++++++++   vg+kktLvfykgrap+g ktdWvmhe+rl
  Zpz_sc01263.1.g00170.1.am.mk 102 YWKATGKDREIYQATSKKpvlVGMKKTLVFYKGRAPTGDKTDWVMHEFRL 151
                                   *************85554566***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.36E-5917188IPR003441NAC domain
PROSITE profilePS5100556.39822188IPR003441NAC domain
PfamPF023652.4E-2523151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 590 aa     Download sequence    Send to blast
MADHHQQQWR TSDDTNSGRL KLPPGFRFHP SDEEIITFYL RPKVINTRFT AHAIGEADIN  60
KCEPWELPEK AKMGEKEWYF YSLKGLKYPS GSRANRATKA GYWKATGKDR EIYQATSKKP  120
VLVGMKKTLV FYKGRAPTGD KTDWVMHEFR LDGSGKLPHP AASSSSSTSM VMKSSSQEEW  180
VICRIYLKSS SVKKAPTPSV DIASMVGAVE QRSMSFPLPM QFPMGPGDFA RGSNTLRHIM  240
DPSPGEVLAR KTGSLIAADP EPVIAYAVAE MRSARRHGRT KVEQSPVTGE NRTEGSVRPA  300
ESPCRRTSTT VLDAPAPPGP AALGVPTAGY CWRPRVPRCR LRRVQSIGRA GAALARRIPS  360
RVLSGTQAGA RSSLTRRSSP VTHPLLQGGT VTRSAAERAP SVRSHLANHR TVVTKRLICN  420
GLLVQCARVA ADVLPHGFLT RGSDSQAFHD ALYLLARFRM DPRGAGWRRR ARAAMFRHLL  480
ARRTEEHARS STLVCFLFGS KEKISFRPHE HEGTCGSPPY GPYPISRGFT RRTAHSGSPG  540
RSPRHLLPYP AGGRLPPRVY NRATGPWPRW NAPTPIVFSV FTPLGVRRRV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A8e-461919414171NO APICAL MERISTEM PROTEIN
1ut4_B8e-461919414171NO APICAL MERISTEM PROTEIN
1ut7_A8e-461919414171NO APICAL MERISTEM PROTEIN
1ut7_B8e-461919414171NO APICAL MERISTEM PROTEIN
4dul_A8e-461919414171NAC domain-containing protein 19
4dul_B8e-461919414171NAC domain-containing protein 19
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01263.1.g00170.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3311234
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.19e-69NAC domain containing protein 100