PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01179.1.g00030.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 297aa    MW: 31865.4 Da    PI: 10.5839
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01179.1.g00030.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM89.36.7e-28752201128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk. 79 
                                   lppGfrF+Ptdeelvv+yL++k+ g +l++  vi+ v d+y ++Pwd+p    a++ e yfF+ r  ++ + + ++ +t+ 
  Zpz_sc01179.1.g00030.1.am.mk  75 LPPGFRFKPTDEELVVQYLRRKAFGAPLPA-AVIPVVrDLYGLDPWDIP---GASDGEKYFFAIRPAASGHVELPRGKTSg 151
                                   79****************************.8899999***********...3467899******9998855444434323 PP

                           NAM  80 .......sgyWkatgkdkevlsk.....kgelvglkktLvfy........kgrapkgektdWvmheyrl 128
                                          sg+Wk  gk ++v+       ++ lvg+++ L+f         k+ ap g  + Wvmheyrl
  Zpz_sc01179.1.g00030.1.am.mk 152 sggatpaSGRWKPDGKGRPVVLPrpcggGSLLVGVRRALAFAprrgkkntKQAAPAGLMAGWVMHEYRL 220
                                   33334469*************99899877777**********9988877767899999*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.05E-3769248IPR003441NAC domain
PROSITE profilePS5100541.59875248IPR003441NAC domain
PfamPF023658.6E-1876220IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MAEESRKNTS ELAPDLLDRL AKIMPVKQDA HRQLAALRSL SERKLRAELP SSPADLSVME  60
RAPVLVRHAG GVATLPPGFR FKPTDEELVV QYLRRKAFGA PLPAAVIPVV RDLYGLDPWD  120
IPGASDGEKY FFAIRPAASG HVELPRGKTS GSGGATPASG RWKPDGKGRP VVLPRPCGGG  180
SLLVGVRRAL AFAPRRGKKN TKQAAPAGLM AGWVMHEYRL AAALLHKNGC SSAETAEGEW  240
VVCRVFRKSR QQQPRRRDQA VPAGDGTVPR RTQPSLSAAS SASCVTDGSD QDDEVSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-24672537173Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01179.1.g00030.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004974022.18e-90NAC domain-containing protein 18
TrEMBLK3YJI92e-88K3YJI9_SETIT; Uncharacterized protein
STRINGSi014408m3e-89(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118183140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.11e-33NAC domain containing protein 41