PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc01086.1.g00200.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 204aa MW: 22313.8 Da PI: 9.9405 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 43.3 | 9.2e-14 | 43 | 88 | 7 | 56 |
AP2 7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 r+++ +grW+Ae+r+p++ + r ++g+f t++eAa a++aa +++ge Zpz_sc01086.1.g00200.1.sm.mk 43 RRRE-WGRWAAELRVPRK---CERLWIGTFATPKEAAHAYDAAIFCFYGE 88 5555.**********854...8**********************999886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 19.941 | 38 | 99 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.2E-17 | 38 | 105 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.22E-15 | 39 | 99 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 4.4E-6 | 39 | 50 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.1E-21 | 40 | 100 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.01E-17 | 40 | 101 | No hit | No description |
Pfam | PF00847 | 8.7E-8 | 43 | 87 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.4E-6 | 61 | 77 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence Send to blast |
MAATALSSSG AATKGKKARR RRGCRSSAMT MAMPKNLGWV GARRREWGRW AAELRVPRKC 60 ERLWIGTFAT PKEAAHAYDA AIFCFYGEHI PKIRKLNFPT APRPDIPEHV RVRLTMANIR 120 AIAEKYAHAL TNYIPPPPPP VVPEAAPQVV VVVPPPVDAS IGSAPTANYG NVNETGVDIL 180 TVADCLLSFN PDDFDEIMHF ANTA |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc01086.1.g00200.1.sm.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5444 | 25 | 55 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31060.1 | 1e-14 | ERF family protein |