PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01008.1.g00080.1.sm.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 351aa    MW: 37207.7 Da    PI: 7.6834
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01008.1.g00080.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.47.3e-14276319548
                                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                                     +r+rr++kNRe+A rsR+RK+a++ eLe +v++L+++Nk+L  +
  Zpz_sc01008.1.g00080.1.sm.mkhc 276 RRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKEQNKELERK 319
                                     79*************************************99765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.9E-11272340IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.047274319IPR004827Basic-leucine zipper domain
CDDcd147071.52E-24276327No hitNo description
PfamPF001707.1E-12276331IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-11276330No hitNo description
Gene3DG3DSA:1.20.5.1707.8E-14276321No hitNo description
PROSITE patternPS000360279294IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MEFKSGRSSS SSSQRRPSSV ADGAPVANQG SVYSLTFDEL QSTLGGAAAG GSGVGKDFGS  60
MNMDELLRNI WTAEETHAMA STSTAGPGAP PAPLQRQSSS LTLPRTFSTK TVDEVWRNLV  120
HDEPQEGAVA GAGQQTQRQS TLGEMTLVEF LVKAGVVREN PAPVLPPMPP PSRPVPVAPK  180
SATAFGNFPG ADDAAAATLG FAPVGMGNLT LGNGLMPRAT GMGAGALAAQ TAVSQLDSGV  240
KGNGDLSSPT ETLPYSFGGM ISGRWNGGGV EKVVERRQRR MIKNRESAAR SRARKQAYTM  300
ELEAEVQKLK EQNKELERKQ VVFLKVLEEM KESQKNESRD MEQATERDGN I
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters. {ECO:0000269|PubMed:10611387}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01008.1.g00080.1.sm.mkhc
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By abscisic acid (ABA). {ECO:0000269|PubMed:10611387}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025802824.11e-130bZIP transcription factor TRAB1-like
SwissprotQ6ZDF33e-92TRAB1_ORYSJ; bZIP transcription factor TRAB1
TrEMBLA0A1E5WFW81e-128A0A1E5WFW8_9POAL; BZIP transcription factor TRAB1
TrEMBLA0A2S3H0261e-129A0A2S3H026_9POAL; Uncharacterized protein
TrEMBLA0A2T7ET331e-129A0A2T7ET33_9POAL; Uncharacterized protein
STRINGPavir.Ba02029.1.p1e-129(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP70638147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49720.12e-33abscisic acid responsive element-binding factor 1
Publications ? help Back to Top
  1. Kagaya Y,Hobo T,Murata M,Ban A,Hattori T
    Abscisic acid-induced transcription is mediated by phosphorylation of an abscisic acid response element binding factor, TRAB1.
    Plant Cell, 2002. 14(12): p. 3177-89
    [PMID:12468735]
  2. Kobayashi Y, et al.
    Abscisic acid-activated SNRK2 protein kinases function in the gene-regulation pathway of ABA signal transduction by phosphorylating ABA response element-binding factors.
    Plant J., 2005. 44(6): p. 939-49
    [PMID:16359387]
  3. Kobayashi F,Maeta E,Terashima A,Takumi S
    Positive role of a wheat HvABI5 ortholog in abiotic stress response of seedlings.
    Physiol Plant, 2008. 134(1): p. 74-86
    [PMID:18433415]