PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00942.1.g00140.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 983aa    MW: 104794 Da    PI: 9.6015
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00942.1.g00140.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY924.6e-29307366159
                                   ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   ++Dgy+WrKYGqK+ ++++ pr+Y+rC++a +Cpvkkkv+rsaed +v++ tYegeHnh+
  Zpz_sc00942.1.g00140.1.am.mk 307 VKDGYQWRKYGQKVTRDNPSPRAYFRCAFApSCPVKKKVQRSAEDSSVLVATYEGEHNHP 366
                                   58***************************99****************************8 PP
2HLH15.92.3e-05671772955
                                   HHHHHHHHHHHHHHHHCTSCCC..........................................................T CS
                           HLH   9 ErrRRdriNsafeeLrellPkas.......................................................kap 34 
                                    r RR+ri +++  L+el+P+a                                                        ++ 
  Zpz_sc00942.1.g00140.1.am.mk 671 TRLRRERIAERMKALQELVPNANkvgaraghiyphvglldrrrapsataragsrpfflleflpmsrarrlsrrttrgfNPF 751
                                   599******************888*************************************************99999777 PP

                                   TS-STCHHHHHHHHHHHHHHH CS
                           HLH  35 skKlsKaeiLekAveYIksLq 55 
                                       +Ka++L + ++Y+k Lq
  Zpz_sc00942.1.g00140.1.am.mk 752 FSATDKATMLDEIIDYVKFLQ 772
                                   77789*************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182901.31E-24303368IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.7E-28305368IPR003657WRKY domain
SMARTSM007746.5E-35307367IPR003657WRKY domain
PfamPF031068.2E-24308366IPR003657WRKY domain
PROSITE profilePS5081127.026309368IPR003657WRKY domain
PROSITE profilePS5088810.131662771IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0049668777IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.47E-8672690IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.7E-9675691IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.47E-8748781IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.7E-9753779IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 983 aa     Download sequence    Send to blast
MTCLKSTGFT RTPPRLNESL LPRSVSAGPS PIGDRRQLSL PLWSLRLHLA ERAFGQVTPP  60
AHDKPKKVKR RNGADARLKM TRVMTLRGMT RTPLTSARVP RRVRRVGTER SQQSHDPPLY  120
STTPAVGSQA SKIPSARGNS IPLHRETTML LMDSARHAGY SPVSLDLNVG LPSMPPPRRD  180
METEADTEPD RPVGGRAAAP MTDEEANKTL LEAKLTEASA ENRRLNEMIA YLHANTASPG  240
LPSPAAGCKK RIRRESPDPS NSCDGGNGDR NDLESARLGV IDEASCKRIK VIRVCTRINP  300
VDTALAVKDG YQWRKYGQKV TRDNPSPRAY FRCAFAPSCP VKKKVQRSAE DSSVLVATYE  360
GEHNHPSPTS AGELRSCATR SGSVPCSISI GSAGPTITLD LTKNGARALD ADEAPEPTEL  420
NKLCKEIASP EFRTALLTYR ATDTELLVPF ANQAVAAGSF QFVATETCTL QLLPPPLVLT  480
LASETLPAGG QAMQPTAREM QAMAAAGQIS LDDLRAAVGG AGGAHDEFLD QMLGAGLPQS  540
AWPDLSGGKA PEGMQQQQFG GLYDESALLA SRLREHQISG DPAGAEEKRM VLQQLTDLRQ  600
GHHGMLLPLS LGSGGSGGDV QALAANSTGG EAGGVFTGSF AGSLQHHQQQ QRFQPHTQVV  660
LLAIPTRQHV TRLRRERIAE RMKALQELVP NANKVGARAG HIYPHVGLLD RRRAPSATAR  720
AGSRPFFLLE FLPMSRARRL SRRTTRGFNP FFSATDKATM LDEIIDYVKF LQLQVLSMSR  780
LGGAGAVAPL VADMSSENPR DVNELFSATA DGYCHAPTAT APRVPHAEMP LLPSRNHRLS  840
LHLSVHAQGR GSGGGAAPAA ESEGLAATEQ QVAKLMEEDM GTAMQYLQGK GLCLMPVSLA  900
SAISSTTCHM RPGSLQAGLG AVAAHRMAAA MRLPPGMNGD AVPASPSLSV LTAQSAMANG  960
VGADGEASQQ QQQAKDAASV SKP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A7e-203073681474WRKY transcription factor 1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16470PKKVKRR
2671676RLRRER
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00942.1.g00140.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025799597.11e-107glycine, alanine and asparagine-rich protein-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP66603552
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.15e-41WRKY DNA-binding protein 18