PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00930.1.g00160.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 608aa    MW: 64686.1 Da    PI: 10.9131
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00930.1.g00160.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY32.41.8e-10468490123
                                   ---SS-EEEEEEE--TT-SS-EE CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprs 23 
                                   ldDgy+WrKYG+K vk+s++pr+
  Zpz_sc00930.1.g00160.1.am.mk 468 LDDGYRWRKYGKKAVKNSPNPRG 490
                                   59*******************95 PP
2WRKY96.71.5e-30519577159
                                   ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                   ldDgy+WrKYG+K vk+s++pr+YYrC+++gC+vkk+ver+++dp++v+++Yeg Hnh 
  Zpz_sc00930.1.g00160.1.am.mk 519 LDDGYRWRKYGKKAVKNSPNPRNYYRCSTEGCNVKKRVERDRDDPSYVVTMYEGVHNHA 577
                                   59********************************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-10455490IPR003657WRKY domain
SuperFamilySSF1182904.45E-8461490IPR003657WRKY domain
PROSITE profilePS5081113.471463490IPR003657WRKY domain
SMARTSM007745.1E-5468507IPR003657WRKY domain
PfamPF031063.0E-6469490IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.3E-32506579IPR003657WRKY domain
SuperFamilySSF1182903.53E-27512579IPR003657WRKY domain
PROSITE profilePS5081131.123514579IPR003657WRKY domain
SMARTSM007747.8E-36519578IPR003657WRKY domain
PfamPF031065.4E-24520576IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 608 aa     Download sequence    Send to blast
LADEVAKQGA AAVVKPVVLP LASRMPPSPF LPSPRLLSDS ADGPSMAAAT RTGGWRIGPR  60
TTDPAAGTAD RRQQRWIRRL GRVTGSRDAG PEVGTAARRT ARGGEGRGKA EVRWASLPRL  120
AVVTTVLRLV RDQLLACSSC GGTAASARPS TATGPRGRRS PAGEQRRGGD GDAGDRGWGC  180
GLSRATGNNT SLTRIMAQIS VHHGTKAPRP IPNLNAWING GSFILPDGRW VKIRLSSGCC  240
CCPCDAAVSA CSGKGTSAAT NQRGGAGGDA SSRTPAKKLR RHQIGSEARC ETRGARALIK  300
TATRRTVGCR MHVALVQARA TAAACLSSHP HAMEYRHPYS SGSASASANY GDASPAADFR  360
PAAFGAGRPA VRRAPLDVFD YLSDEGAQPA PAAVPAVPTF RSPPPRSMPA VQVVPDAAGY  420
GHAARPRGFM YLNIFFPRGA ASVAVAAEEP TTMTDRIAFR MRSDKEVLDD GYRWRKYGKK  480
AVKNSPNPRG AASVAVAAEE PTTMTDRIAF RMRSDKEVLD DGYRWRKYGK KAVKNSPNPR  540
NYYRCSTEGC NVKKRVERDR DDPSYVVTMY EGVHNHASPG TVYYATQDAA SGRFFVSGTH  600
HSSGPLKL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A6e-225145791277Probable WRKY transcription factor 4
2lex_A6e-225145791277Probable WRKY transcription factor 4
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00930.1.g00160.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44137206
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.18e-36WRKY DNA-binding protein 50