PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00812.1.g00250.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 754aa    MW: 82223 Da    PI: 10.7668
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00812.1.g00250.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.41.3e-071031442162
                                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1  21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                                   R+R+ka+++ Le kvk Le++N+++ ++l++l++e + l++ 
  Zpz_sc00812.1.g00250.1.am.mk 103 RERRKAYLADLEVKVKDLEKKNSEMEEKLSTLQNENQMLRQI 144
                                   9************************************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.3E-492147IPR004827Basic-leucine zipper domain
CDDcd147044.26E-1096139No hitNo description
SuperFamilySSF579591.44E-5102146No hitNo description
Gene3DG3DSA:1.20.5.1702.0E-8102147No hitNo description
SuperFamilySSF813834.71E-7395475IPR001810F-box domain
PfamPF006468.8E-5400436IPR001810F-box domain
Gene3DG3DSA:2.130.10.803.5E-38425681IPR015916Galactose oxidase, beta-propeller
SuperFamilySSF1172811.7E-40459697No hitNo description
SMARTSM006120.003501548IPR006652Kelch repeat type 1
PfamPF013444.6E-12537583IPR006652Kelch repeat type 1
SMARTSM006121.8E-6549597IPR006652Kelch repeat type 1
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 754 aa     Download sequence    Send to blast
MDRMQEQAAS SLPSSSERSS SSAHHMEMDL KEGKRLRMES DEEIRRVPEL GLELPSGPST  60
SGREAGGAEG AQASSAAAAQ SGGRRRLRTP ADKEHKRLKR FARERRKAYL ADLEVKVKDL  120
EKKNSEMEEK LSTLQNENQM LRQILKNTTV SRRGPDGARP RIDLPTLGAV GGRSCRLTRP  180
PPPVSFRLVL IPSDSKTVTS RGRNVFRRAA SLACVRSPPL PSCPAKKSCA SLGRSCQCPL  240
GPRPETHEHG LNLITRGGRG SLHLLVVSHQ PPPPSFFLLL AAAPGQARPA AAGRWEGEDS  300
FWLGGLRVGR AVSSCFVPWF TRHAVRRRRA SRSWSMAVDS SSASCLCRVE KSSVAGAAAR  360
RVPLPRACAQ RSVRASIHPL KPKASPRQGD RSRGGQCPLL PGLPDDLAIA CLIRVPRADH  420
SALRLVSRRW FRLLAGNYFY GLRRRLGLAE QWLYAVKRDR DGLVSWDALD PARGAWRALP  480
PVPQEYGDAD GFGCAVLGGC HLYLLGGKDP RRGTMRRVVF FSARSNRWHR APDMLRRRHC  540
FGSCVMGNRL YVAGGESGGG GGCIRSAEVF DPAKNRWSIL SDMAAAMVPF VSAVHGGRWY  600
LKGFGPQQQV ISQVYSPETD AWSVVLDGLV TGWKSPSACL DGRLYAADCK DGCRLRAYDE  660
AADAWTSCVD SEQHRGSSHA VEATAIVPLG SRVCVVRNDM SVSAVGLVAG TANQRWETLA  720
VKSHAKKFVS DILSSIAGRA RAKNSILHCQ VLEA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4ch9_A9e-1446766670270KELCH-LIKE PROTEIN 3
4ch9_B9e-1446766670270KELCH-LIKE PROTEIN 3
5nkp_A9e-1446766670270Kelch-like protein 3
5nkp_B9e-1446766670270Kelch-like protein 3
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00812.1.g00250.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004951526.10.0F-box/kelch-repeat protein At1g55270
SwissprotQ93W931e-163FBK22_ARATH; F-box/kelch-repeat protein At1g55270
TrEMBLA0A3L6RQY00.0A0A3L6RQY0_PANMI; F-box/kelch-repeat protein
STRINGSi017291m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP171322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.13e-28bZIP family protein
Publications ? help Back to Top
  1. Yu SI,Kim H,Yun DJ,Suh MC,Lee BH
    Post-translational and transcriptional regulation of phenylpropanoid biosynthesis pathway by Kelch repeat F-box protein SAGL1.
    Plant Mol. Biol., 2019. 99(1-2): p. 135-148
    [PMID:30542810]