PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00799.1.g00100.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 355aa    MW: 38654.3 Da    PI: 8.8988
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00799.1.g00100.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY322.4e-1093142259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                   dDg++WrKYG K+  +s fpr  +r   +        +++++dp ++ +tY ++H+++
  Zpz_sc00799.1.g00100.1.am.mk  93 DDGHQWRKYGEKKLSNSSFPRFVFRSQVQ--------QKDTSDPPLFSVTYFNHHTCS 142
                                   8*********************9996443........356779************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.3E-1183142IPR003657WRKY domain
SuperFamilySSF1182906.15E-1385143IPR003657WRKY domain
PROSITE profilePS508119.17987158IPR003657WRKY domain
SMARTSM007745.8E-1492143IPR003657WRKY domain
PfamPF031061.3E-1193141IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MQRHGMSCSP ARGFVSPWRE SRPPSEFSEE TSPLPSVQPP ASYLHFILAM ALESVPLYPG  60
GDLASSRATS RAHQQRIRKD GRSWTTDTYA PYDDGHQWRK YGEKKLSNSS FPRFVFRSQV  120
QQKDTSDPPL FSVTYFNHHT CSTSSGPMGR GSYTRDATVQ SSPKKAVSIC FSSHSSSEQP  180
TFLTPAVTPA SPNTQSYRAN QQLDRSAYAG RQFQWPGTSS PGSNGLLKME IDNFSEASAS  240
SSSSGVLSRT LLPIGQSRCI EYFHFLPRTP LQHPGVSVPL PVAYGMQGAR VEPTCPQVIA  300
ADADDASSAT ATTAKATTSA CLVTRAIDRS VTCACCCARA SDLRVKCVLC VERMK
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00799.1.g00100.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKU0586295e-36KU058629.1 UNVERIFIED: Panicum miliaceum WRKY20-like gene, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025827915.15e-91probable WRKY transcription factor 46 isoform X1
TrEMBLA0A3L6R8802e-93A0A3L6R880_PANMI; Putative WRKY transcription factor 48
STRINGPavir.J31578.1.p4e-91(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP203235100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.13e-10WRKY DNA-binding protein 46