PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc00775.1.g00240.1.es.mkhc | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | TALE | ||||||||
Protein Properties | Length: 115aa MW: 12912.9 Da PI: 11.3501 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 14.4 | 6.6e-05 | 84 | 111 | 19 | 44 |
HHH..SSS--HHHHHHHHHHCTS-HHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqV 44 Fe ++yp+ ++++ LAk++gLt +q Zpz_sc00775.1.g00240.1.es.mkhc 84 FEHflHPYPTDSDKQMLAKQTGLTRNQA 111 664459******************9985 PP | |||||||
2 | BELL | 21.5 | 5.8e-08 | 1 | 21 | 52 | 72 |
BELL 52 lAlkaiSrhFrcLkdaiaeqi 72 +Al+++S+hFrcLk i +q+ Zpz_sc00775.1.g00240.1.es.mkhc 1 MALRTMSKHFRCLKGVILNQL 21 7****************9996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 8.13E-9 | 55 | 112 | IPR009057 | Homeodomain-like |
CDD | cd00086 | 1.81E-6 | 65 | 110 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 1.3E-16 | 68 | 113 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 2.2E-10 | 82 | 113 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 115 aa Download sequence Send to blast |
MALRTMSKHF RCLKGVILNQ LRNTSKVAND GMGKDDMANF ALMGGSSGLL KGSSVNAFNQ 60 PHNIWRPQRG LPERAVSVLR AWLFEHFLHP YPTDSDKQML AKQTGLTRNQ ARNFA |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc00775.1.g00240.1.es.mkhc |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004961888.1 | 2e-67 | BEL1-like homeodomain protein 9 | ||||
Swissprot | Q9SJ56 | 1e-31 | BLH1_ARATH; BEL1-like homeodomain protein 1 | ||||
TrEMBL | A0A0A9CHG6 | 4e-66 | A0A0A9CHG6_ARUDO; Uncharacterized protein | ||||
TrEMBL | A0A1E5W6R5 | 7e-66 | A0A1E5W6R5_9POAL; BEL1-like homeodomain protein 9 | ||||
TrEMBL | K3Z508 | 6e-66 | K3Z508_SETIT; Uncharacterized protein | ||||
STRING | Si021626m | 1e-66 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP20695 | 3 | 7 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35940.3 | 1e-33 | BEL1-like homeodomain 1 |
Publications ? help Back to Top | |||
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