PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00698.1.g00100.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 292aa    MW: 31310.1 Da    PI: 7.5479
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00698.1.g00100.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY82.93.2e-26108167258
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                                   dDg++WrKYGqK++ g+++pr+Y+rCt++   gCp++k+v+r+++dp v++++Y+geH+ 
  Zpz_sc00698.1.g00100.1.sm.mk 108 DDGHSWRKYGQKDILGARHPRAYHRCTYRssqGCPATKQVQRTDSDPAVIDVVYHGEHTR 167
                                   8**************************998889*************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.9E-2696167IPR003657WRKY domain
PROSITE profilePS5081122.641102170IPR003657WRKY domain
SuperFamilySSF1182901.96E-23105167IPR003657WRKY domain
SMARTSM007741.3E-34107169IPR003657WRKY domain
PfamPF031064.2E-24108166IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MDGASVQQQQ LGAELCHVQD LLRDLDLHLH SPSSYSVDQC RRLVAEIVAL TDRSIGMAAA  60
AVLRPLSDAG SGPFRGSGCS PMKRKATARW SGQVRVSCAA GAAKGPADDG HSWRKYGQKD  120
ILGARHPRAY HRCTYRSSQG CPATKQVQRT DSDPAVIDVV YHGEHTRRSA VSGARKTPQH  180
NAHAEGLVAR LTVATTDAAV PPMTPESCPP LGAPSPWSLA STVGSDSNTV YPCPVNWPLD  240
GNLQEVVSAF AVRSGGAHQT ALDTEFMRPE YLGNFDYQSF DIGALETMQS LF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-18108168969OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00698.1.g00100.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001147379.16e-83uncharacterized protein LOC100280987
RefseqXP_025820899.16e-83probable WRKY transcription factor 41
TrEMBLA0A368RL202e-85A0A368RL20_SETIT; Uncharacterized protein
STRINGPavir.Fa01520.1.p2e-86(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108638131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.22e-26WRKY family protein