PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc00680.1.g00040.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 257aa MW: 27879.3 Da PI: 9.2568 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.3 | 6e-21 | 105 | 154 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +grW+AeIrdp + +r++lg+f+taeeAa+a++aa ++l+g Zpz_sc00680.1.g00040.1.am.mk 105 RYTGVRRRP-WGRWAAEIRDP-----QlrRRVWLGTFDTAEEAAAAYDAACRRLRG 154 69*******.**********9.....445*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 6.41E-20 | 105 | 162 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 22.589 | 105 | 162 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.9E-14 | 105 | 154 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 6.26E-15 | 105 | 160 | No hit | No description |
SMART | SM00380 | 6.8E-29 | 105 | 168 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.0E-27 | 105 | 161 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.8E-10 | 106 | 117 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.8E-10 | 128 | 144 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence Send to blast |
MDPSLETRKA AAGEAAVGIE EDKLAVEVEE PAAPRCRLVR IIVHDEDATD SSSDEDDDEG 60 QEERKRRVQP PAAAPAGVKR KRVMLRAAGG EGEERKKAAA EEEVRYTGVR RRPWGRWAAE 120 IRDPQLRRRV WLGTFDTAEE AAAAYDAACR RLRGSGAATN LSSGDTTPAH RPAAAPLPPR 180 PPLPPIRRPP QQEKKPPPPS QDSPPETEKQ TAASSSPEPF VPLPVWALLS GKRKKRSGCG 240 GRVPALRTPP AEEASRA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 7e-17 | 97 | 161 | 6 | 71 | Ethylene-responsive transcription factor ERF096 |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 64 | 81 | KRRVQPPAAAPAGVKRKR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc00680.1.g00040.1.am.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP27695 | 3 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G03800.1 | 3e-16 | ERF domain protein 10 |