PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zpz_sc00466.1.g00110.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 257aa MW: 28601.8 Da PI: 5.0235 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 62 | 1.8e-19 | 12 | 142 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk....kvkaeek.ewyfFskrdkkyatgkrknr 76 ppG+ F+Ptdeel+ +yL ++ gk+ ++ v +++ + +++Pw+L + ++ +++ +f+++ ++ +r++r Zpz_sc00466.1.g00110.1.sm.mk 12 PPGLIFDPTDEELIEHYLLPRSLGKPEAFSVViVEDNKAANTQPWKLFQnhdlMALIDDHlPAFFYVRDERP--DARRSRR 90 8*************************777666356669*********6334542222444355777777664..5679999 PP NAM 77 atksgyWkatgk....dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 g Wk + + d++vl ++++ ++++ L ++ + + Wvmhe+ Zpz_sc00466.1.g00110.1.sm.mk 91 CEGGGWWKIQKSeskdDRHVLIVgGRKVRWTRNNLNLHLDSG----SVGWVMHEFF 142 999999*966542333566666556777899*******5443....568*****96 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.66E-23 | 10 | 148 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 22.963 | 11 | 174 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.2E-14 | 12 | 141 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 257 aa Download sequence Send to blast |
MSPAKCLGDD HPPGLIFDPT DEELIEHYLL PRSLGKPEAF SVVIVEDNKA ANTQPWKLFQ 60 NHDLMALIDD HLPAFFYVRD ERPDARRSRR CEGGGWWKIQ KSESKDDRHV LIVGGRKVRW 120 TRNNLNLHLD SGSVGWVMHE FFIDDHPLLK PDGHAHDDAS LGGEQPVTQR LRVTAAAGSS 180 SADSTTTTTS LDQNLGTAHA SEDQEHPSAS AMPMPIHNSR ADLDPVNIIY DGEFQALLAT 240 ADAAMAPFRV LFNHDEE |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Zpz_sc00466.1.g00110.1.sm.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP8717 | 9 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G10500.1 | 2e-08 | NAC domain containing protein 53 |