PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc00455.1.g00040.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 229aa MW: 25516.1 Da PI: 9.6087 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 33.5 | 1.3e-10 | 16 | 60 | 2 | 47 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL 47 ++G++F+Ptd+e+vv+yL+ ++ + +l+ +i++ di++++P+dL Zpz_sc00455.1.g00040.1.sm.mk 16 AQGYKFNPTDQEIVVRYLRCRAVNCQLPS-AIIADRDILDHHPSDL 60 68**********************99999.78*************9 PP | |||||||
2 | NAM | 33.1 | 1.7e-10 | 64 | 92 | 100 | 128 |
NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +g+k+tLvfy+g+ p+ge+tdWvm ey+l Zpz_sc00455.1.g00040.1.sm.mk 64 TGIKRTLVFYHGKPPSGERTDWVMREYSL 92 79*************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 14.465 | 1 | 156 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.62E-23 | 12 | 102 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.3E-9 | 17 | 92 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.62E-23 | 144 | 156 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence Send to blast |
MAASIPLASG ATIPLAQGYK FNPTDQEIVV RYLRCRAVNC QLPSAIIADR DILDHHPSDL 60 VPETGIKRTL VFYHGKPPSG ERTDWVMREY SLAGRGLSPY CVMMPCTNNN SGQLNGIVKE 120 HEDPSVTFSA TAPSIENANI MLNPDSSWVV CRIHKKRARK SPLIIRANNN AGAEKIPFYD 180 FLGQGNHYEG TASSSVPLWR RKTLKSKTRE AAQRMRAQKM AFDSVWESN |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc00455.1.g00040.1.sm.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A1E5VDA0 | 2e-45 | A0A1E5VDA0_9POAL; NAC domain-containing protein 41 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4482 | 23 | 69 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 2e-15 | NAC domain containing protein 83 |