PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00429.1.g00300.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 281aa    MW: 31019.4 Da    PI: 5.0086
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00429.1.g00300.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY64.61.6e-2083145259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S..SSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa..edpkvveitYegeHnhe 59 
                                   +Dgy+WrKYG K+ +g++f+rsY+rCt++   gC ++k v++++  +d+ ++++tY+++H+++
  Zpz_sc00429.1.g00300.1.am.mk  83 EDGYEWRKYGEKSFNGTHFTRSYFRCTYKgdkGCLATKYVQQQNdsSDTPMFKVTYNNDHTCN 145
                                   8***************************99999*******9875226899***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182905.23E-2076146IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.3E-2177145IPR003657WRKY domain
SMARTSM007742.0E-2782146IPR003657WRKY domain
PfamPF031061.1E-2183144IPR003657WRKY domain
PROSITE profilePS5081116.36383147IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MAWLPDYLEP AVREVAHVSE LIKTHQPLLL LHLQGQTAQP LAQTPQVNYQ PIPRDLRGAA  60
KEEANEGGGK TKSWALLTTV PHEDGYEWRK YGEKSFNGTH FTRSYFRCTY KGDKGCLATK  120
YVQQQNDSSD TPMFKVTYNN DHTCNCTAGS PSSAKNNINN IPVAGGAAAS NYPPTGGHHD  180
FMVTEQETTA VVPPPLADGS AGVRLDEQMP CAHQERLAIT DRYDVTVGAV GESSRLPGVS  240
SNELDRQIVT EPMMGDYDQE LQDDLELLFL HDNFCYRSTT G
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00429.1.g00300.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025805829.14e-46WRKY transcription factor 55-like
TrEMBLA0A2T7E4J22e-46A0A2T7E4J2_9POAL; Uncharacterized protein
STRINGPavir.Ca00178.1.p8e-41(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50452663
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40750.15e-17WRKY DNA-binding protein 54