PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zpz_sc00429.1.g00290.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 225aa MW: 24890.7 Da PI: 5.9433 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 29.2 | 1.9e-09 | 20 | 65 | 19 | 59 |
SS-EEEEEE-ST...T---EEEEEE-S..SSTTEEEEEEES--SS- CS WRKY 19 efprsYYrCtsa...gCpvkkkversa..edpkvveitYegeHnhe 59 +f sY+rCt++ gC ++k v++++ +d+ +++++Y+++H+++ Zpz_sc00429.1.g00290.1.am.mk 20 PFKGSYFRCTYKddtGCLATKYVQQKNdsSDTPMFQVIYNNDHTCN 65 56679******99999*******9875226899***********97 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00774 | 2.0E-7 | 14 | 66 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.84E-9 | 18 | 66 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.9E-11 | 18 | 64 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.0E-8 | 19 | 65 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 225 aa Download sequence Send to blast |
MIDRRLRVEE IWREEDQRHP FKGSYFRCTY KDDTGCLATK YVQQKNDSSD TPMFQVIYNN 60 DHTCNCTAAS SSSAKKNIST LPIPGGAAGH RDFVVTEQEA TAVALPPLAD VSSVDVALDE 120 QIQEPFAITD YCDFTIGAAG EIWANRLRTV RSGQHVQHVP FWTMASSSSP PPPGFKRLIK 180 QSCKLLAAED HSQTQQAGVG VYTREDAGKR MQQTASSGTG EWTVE |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Zpz_sc00429.1.g00290.1.am.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP27829 | 3 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G40750.1 | 7e-08 | WRKY DNA-binding protein 54 |