PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00410.1.g00270.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 881aa    MW: 93817.8 Da    PI: 11.8718
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00410.1.g00270.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.2e-20682733156
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                   ++y+GVr ++ +gr++AeIrdp    k+ r++lg+++taeeAa+a++aa+++++g+
  Zpz_sc00410.1.g00270.1.am.mk 682 PHYRGVRKRP-WGRFAAEIRDPA---KKSRVWLGTYDTAEEAARAYDAAAREYRGA 733
                                   68********.**********83...36**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.5E-14682732IPR001471AP2/ERF domain
CDDcd000187.08E-15682740No hitNo description
SuperFamilySSF541714.97E-22683741IPR016177DNA-binding domain
SMARTSM003802.4E-37683746IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-31683740IPR001471AP2/ERF domain
PROSITE profilePS5103224.302683740IPR001471AP2/ERF domain
PRINTSPR003673.7E-10684695IPR001471AP2/ERF domain
PRINTSPR003673.7E-10706722IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 881 aa     Download sequence    Send to blast
MPPLSPSPFI SSTTPPPAIN TGVPSAARPH ALTPRRSRSR TIPRSFLSSR CPAEPTRTAG  60
PNESGQYTDR PGRNHARGGR HTRSAESGSE FCKTASSARP KRPPLVAAAA APGIQKLRRS  120
RKNRASRTAP AHHTTTILPR YHLCGVGNDP ATWSQTRQRR VKKKAPSTPF GRPAGPHAGV  180
RACTARDLLY RPHLAVQCEY GDLDFFTRKR VGRPPDPALR GAWTVGRSPP AWIRRYPTPS  240
RLTNVRLSAT GGCRIPWFGE TLLRNRGPRA ACHHKWTSGR CSPVPGTPPF GLGRAAPRAP  300
SCDPGRERAA ASRACGGVAL RGDGEDASSL APAAPTGGVR TYARRHRRVA VSPRAVGPVS  360
AANARTAARR GNGCWWWLRD PIRAQRARAE PADADTWPAP PPRTDRPPSN VPSSAVPLGA  420
STLSRQPPPT LRGDYGPSGG RAGGFIGLRS CVCVSVVHWT SRTHLLARAD DAVGDTIRVT  480
ATRGAGRTEG GDGRRMPVRA RERRRTETAA RDARIVMPPR SSRRAHDARD VLPQRAARRA  540
PRVSFPIETA PDAAQFAARQ GVEWEKAPRG TVKCRHAKHE ARRRGGDSQS ARSLTAPSFI  600
PCGRSTTRAA LTASPPFLTR PSSSPRYKSS PGLPPNPRHL PSTRERNNTA TMAPRTSEKT  660
TQPATAATGL ALGVGCGGAG GPHYRGVRKR PWGRFAAEIR DPAKKSRVWL GTYDTAEEAA  720
RAYDAAAREY RGAKAKTNFP FLSSSSPAPV AVTGGGTGSG SSNSSTVESF GCDVQAPPMQ  780
AMPLPPSLEL DLFSRGAGAV RFPFTGYPVS QPYYFYGQAA AAAGCHVLKL APTVTVAAVA  840
QSDSDSSSVV DLAPSPPAVS AQKTVAFDLD LNCPPPTEAE A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-21679745168ATERF1
3gcc_A3e-21679745168ATERF1
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00410.1.g00270.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38463174
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-15erf domain protein 9