PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00379.1.g00180.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 288aa    MW: 31253.9 Da    PI: 7.0441
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00379.1.g00180.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY64.81.4e-20124185258
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-S...SSTTEEEEEEES--SS CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversa...edpkvveitYegeHnh 58 
                                   +Dg+ WrKYGqKe++g ++pr Y+rC+ +  gC+++++v+r++   e+p + ei Y g H++
  Zpz_sc00379.1.g00180.1.sm.mk 124 EDGFIWRKYGQKEINGRKHPRLYFRCANRhqGCTATRRVQRTHvddEEPPAYEIAYYGAHTC 185
                                   7*************************98777**********8722255779*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.9E-22118186IPR003657WRKY domain
SuperFamilySSF1182902.88E-20118186IPR003657WRKY domain
PROSITE profilePS5081116.777118168IPR003657WRKY domain
SMARTSM007741.7E-27123187IPR003657WRKY domain
PfamPF031061.6E-22124185IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MALATPDAVV LELMTMGRQS AAHLGYLLRS ASPASPHQDL AAEILRCCER VISRLKANGG  60
ASGCCNKRKA AEHNGSAAAW SPPSTPPRKS WRGSNANKRC RSIGLHRARV GAEALGVVTS  120
RTTEDGFIWR KYGQKEINGR KHPRLYFRCA NRHQGCTATR RVQRTHVDDE EPPAYEIAYY  180
GAHTCGGTAA CQPQLPPTVV DFGFSAWGCS TAPAASEQPW LSCDSETSEA GFDEAQTTTM  240
HEWHHAAALV EVPSATTPCY ASDPVTEFLD GCFDWESVIN DVPFDFGA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-16118185368OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00379.1.g00180.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025817680.11e-88probable WRKY transcription factor 66
TrEMBLA0A3L6R3U88e-89A0A3L6R3U8_PANMI; Putative WRKY transcription factor 38
STRINGPavir.Ea03258.1.p9e-86(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP83223147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.19e-21WRKY DNA-binding protein 46