PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00379.1.g00120.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 302aa    MW: 33524.9 Da    PI: 9.7096
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00379.1.g00120.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY28.72.6e-091632032258
                                   EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS CS
                          WRKY  22 rsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnh 58 
                                   + YYrCt++   +Cp++k+ve++ ++dp ++ ++Y++eH++
  Zpz_sc00379.1.g00120.1.am.mk 163 KFYYRCTYHqdhSCPATKHVEQTnSQDPPLFRVIYTNEHTC 203
                                   67******98999*******975268*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007741.8E-7152205IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.4E-8160203IPR003657WRKY domain
SuperFamilySSF1182901.96E-8160203IPR003657WRKY domain
PfamPF031068.1E-11160203IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MTTPSRIERR QRSTKIPAKS SPLRKARRRE TATGATPRRP LGPVRWRSCK ATDGGAAGPG  60
SGVYTAPSFA IDRRDLRQAE LTVGGWGFKV FRHRRHAKKR TSNHLEEQRI ALQVPTTFFI  120
PYARLVAMAK RDDYKTSSSG CSNGTHKRLL QDISGYAQEH AKKFYYRCTY HQDHSCPATK  180
HVEQTNSQDP PLFRVIYTNE HTCICGDPSS IHIQQMADAS LRKAEIELFP SLAPCNAGHG  240
MIKEEEGAIV SSLLGVINGG DDVATSESLS RDMQENTAAL SSILLPASEE PRMNLVEPLE  300
SH
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00379.1.g00120.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004972233.12e-61probable WRKY transcription factor 29
TrEMBLA0A1E5V3T94e-61A0A1E5V3T9_9POAL; Uncharacterized protein
STRINGSi004791m7e-61(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118143139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22570.14e-08WRKY DNA-binding protein 38