PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00374.1.g00170.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 653aa    MW: 70615.5 Da    PI: 11.5276
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00374.1.g00170.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_154.82.1e-17584636355
                                   XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                                   ++ r +r++kNRe+A rsR+RK+a++ eLe++vk L++eN++L+ + e+l+  
  Zpz_sc00374.1.g00170.1.am.mk 584 SDHRKKRMIKNRESAARSRARKQAYVRELEREVKLLQQENQSLRVKYEQLRVS 636
                                   7899*****************************************99999865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.8E-12582647IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.668584634IPR004827Basic-leucine zipper domain
PfamPF001707.6E-16585636IPR004827Basic-leucine zipper domain
CDDcd147071.43E-17586633No hitNo description
SuperFamilySSF579591.38E-11586635No hitNo description
Gene3DG3DSA:1.20.5.1705.1E-15587637No hitNo description
PROSITE patternPS000360589604IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009911Biological Processpositive regulation of flower development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000028Biological Processregulation of photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 653 aa     Download sequence    Send to blast
MRSFSIWEKT CTDAIDLPTG ETKTAASSAP LRAGACCPGK RAQKASESSP APTHEPPVRT  60
VPRLAEAASL AASHPPPPRA RSRHCVRSLL LNRGDAASAA ARTHRPLRSA RHPGAALISA  120
AACGHARGRR RPSVLLPPPR LQLCRLQWPP CVRHVTLPRA RGEARRQRRT GAPTPPSYTL  180
RRTSRASAMG GARCGYHECM CRALIGSVLG GTRTPKSREA TKLGGATAGS GPAASYRALS  240
RVVLDCWSLC FPTLDTNTTS TVPTDTGLLP FLVTAESAQI ARKNRPKAKT TAPHMMTPRD  300
AIALYCDHRN LDSAHRPGSW FHPHPTKKER RRYSKPFSRD SPCAMRKRRR GQRQSPAALA  360
TEPSATALPA SSEIDDLLAN LFSEPLDRRG NSSARVGQAQ IPTEKCLFVS LACLLCPLPG  420
DRSNGTAQQQ EERKAQPTAR PRANAMAAMD MDDDEDIWAN TSSPSASPPQ PAGAAAREGF  480
ISTQLSLNSQ LHLLSSAAAH GGSPPDRSGG DGVFAADGGI RDHVVGFGGG AFRXXXXRRR  540
LPQCRGGPGA VFLPLRPRRR RGALEHEMCL GPTGAAWGGA VGSSDHRKKR MIKNRESAAR  600
SRARKQAYVR ELEREVKLLQ QENQSLRVKY EQLRVSVEVP VKKTLRRLPS APF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1329349RRRYSKPFSRDSPCAMRKRRR
2345349RKRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00374.1.g00170.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLC0201152e-52LC020115.1 Sasa veitchii var. hirsuta SvFDL1 mRNA for FD-like gene, complete cds, strain: SvFLD1c.
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17770.21e-18basic region/leucine zipper motif 27