PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00356.1.g00120.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 299aa    MW: 31901.8 Da    PI: 8.4334
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00356.1.g00120.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.8e-20148198255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   +y+GVr+++ +g+++AeIrdp +ng  +r++lg+++tae+Aa a+++a+ +++g
  Zpz_sc00356.1.g00120.1.am.mk 148 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYDTAEDAALAYDRAAYRMRG 198
                                   8********.***********9987..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.77E-30147206No hitNo description
Gene3DG3DSA:3.30.730.104.9E-32147206IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-23148208IPR016177DNA-binding domain
PfamPF008472.5E-14148198IPR001471AP2/ERF domain
SMARTSM003802.2E-38148212IPR001471AP2/ERF domain
PROSITE profilePS5103224.25148206IPR001471AP2/ERF domain
PRINTSPR003671.0E-10149160IPR001471AP2/ERF domain
PRINTSPR003671.0E-10172188IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MLLKPASEAL VLDSIRQPLL EESAAVVKKE EATTRPGYRR SASFESLVAD QWSDSLPFRT  60
DDADDMVVFG ALRDAFAYGW LPDGSFAAVK PEPLPSPDCS SCSYDGSYSF GVAEPPLTPG  120
SSCTTDQATP KRDEQEQAAA AAVARGKHYR GVRQRPWGKF AAEIRDPAKN GARVWLGTYD  180
TAEDAALAYD RAAYRMRGSR ALLNFPLRIG SEIAAAAAAA AKRPSPKPAT SSDSSSFSSS  240
SSSSGSPKRR KRGEAAAATM SLPLVPPPSQ LSRPAQPWFP AVPAEQVVAI APRVEQLVI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-39144211168ATERF1
3gcc_A1e-39144211168ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator and may be involved in disease resistance pathways. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00356.1.g00120.1.am.mk
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethephon (ethylene-releasing compound) in buds and to a lower extent in leaves. Strongly induced by cycloheximide and mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by both protein kinases and protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025826088.11e-118ethylene-responsive transcription factor 2-like
SwissprotQ404793e-58ERF2_TOBAC; Ethylene-responsive transcription factor 2
TrEMBLA0A0A9QX361e-118A0A0A9QX36_ARUDO; Uncharacterized protein
STRINGTraes_2BL_CF47A74CC.21e-118(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38002972
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.17e-38ethylene responsive element binding factor 1
Publications ? help Back to Top
  1. Nakano T,Nishiuchi T,Suzuki K,Fujimura T,Shinshi H
    Studies on transcriptional regulation of endogenous genes by ERF2 transcription factor in tobacco cells.
    Plant Cell Physiol., 2006. 47(4): p. 554-8
    [PMID:16452120]