PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00304.1.g00380.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family C2H2
Protein Properties Length: 567aa    MW: 60441.5 Da    PI: 10.0506
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00304.1.g00380.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.00013260281223
                                   EETTTTEEESSHHHHHHHHHHT CS
                       zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                                   +C  C+++F ++  L  H+r H
  Zpz_sc00304.1.g00380.1.am.mk 260 TCRLCSRRFASPRALAGHMRAH 281
                                   6*******************99 PP
2zf-C2H210.80.0015480502123
                                   EEETTTTEEESSHHHHHHHHHHT CS
                       zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                                   ++Cp+C ++Fs+   L  H r+H
  Zpz_sc00304.1.g00380.1.am.mk 480 HQCPHCFRVFSSGQALGGHRRSH 502
                                   79*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.035259281IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.577259282IPR007087Zinc finger, C2H2
SuperFamilySSF576675.05E-6260281No hitNo description
PfamPF138945.7E-4260281No hitNo description
PROSITE patternPS000280261281IPR007087Zinc finger, C2H2
SuperFamilySSF576675.05E-6411435No hitNo description
PfamPF139121.5E-9415440IPR007087Zinc finger, C2H2
SMARTSM0035555416436IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.517416445IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.221480507IPR007087Zinc finger, C2H2
PfamPF139125.6E-9480502IPR007087Zinc finger, C2H2
SMARTSM003550.15480502IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280482502IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 567 aa     Download sequence    Send to blast
MALPTSGPPP LPPLKKVRQQ VTVEYSAVPR PVTDGYPKIG GQGQSRKMTG KRGGGGEATS  60
SATDWRLSGR NTWLGRRRTH DDGKETGCCY GDAWAAMLPG EGGWPARWMP CSLAKLLTLS  120
ANKHLRFQQG FYAGISGTNL RSNMVEVSGS FREPEELLGR NNETRLQFQQ ALLPASLPPA  180
FGRKLLSEQI NHAVPAATAK AGASQAGGGN RTFSPGSDGR EQQLSPSSAP NKARYFRRRA  240
LSGAFVPRLV LQALAMAKNT CRLCSRRFAS PRALAGHMRA HSIAAAKSQI SSASSASTSV  300
VAGGGAEKPV QGYVLREKPK RRVRLAESDI SDSESETSGF PSSWPSAKHG HAAGSGDAEP  360
VSSVSDGVTP EQDVAMLLVM LSRDSWPLPP VMPSYQVDSD DECDARQPIA QKRTRYECPA  420
CKKAFRSYQA LGGHRASNVR GGKGGCCAPP PPLYTPPPSP MQPLLARDGE EGGAWKPLPH  480
QCPHCFRVFS SGQALGGHRR SHFCTAPVAA EKTGAVPLPV PMKSLGCIDL NLPPTWDDVE  540
LSAVSDPFLS SKPGYESKQS MAGKPFG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1317323KPKRRVR
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00304.1.g00380.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006652618.11e-102PREDICTED: zinc finger protein ZAT1-like
TrEMBLA0A3L6Q7111e-108A0A3L6Q711_PANMI; Zinc finger protein ZAT1-like
STRINGOPUNC04G18700.11e-105(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35183377
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45120.11e-22C2H2-like zinc finger protein