PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00243.1.g00430.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 479aa    MW: 50381.9 Da    PI: 9.6646
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00243.1.g00430.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.21.5e-114391254
                           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                                  +y+GV+  ++ +++ A I+dp++   ++r++lg+++t+eeAa a++aa + ++
  Zpz_sc00243.1.g00430.1.am.mk 43 RYHGVT-SRYGNKFGAMIQDPKT---KRRVWLGTYDTPEEAACAYDAAVRTMK 91
                                  699**9.67799********954...5*********************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.107.9E-1943100IPR001471AP2/ERF domain
SuperFamilySSF541714.18E-134399IPR016177DNA-binding domain
CDDcd000181.28E-1543101No hitNo description
PROSITE profilePS5103214.3414399IPR001471AP2/ERF domain
SMARTSM003807.8E-1643105IPR001471AP2/ERF domain
PfamPF008475.2E-54590IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 479 aa     Download sequence    Send to blast
MLRIATMASN EAAGRPQRDE GWWLPLRADR VAQGREPSSS GRRYHGVTSR YGNKFGAMIQ  60
DPKTKRRVWL GTYDTPEEAA CAYDAAVRTM KSNPKFNFPE LIRGEEEKSA AAVLAHFAET  120
KRKRKLAEEA VPPPSAPAPA GDVVGLPEPP TNFPGEEDAL AALKMLQGQG EASSKNKALE  180
AVVSSLSPAP SSSSAPAAPT SHYASTPVST AFKYPFFAPT SAGSTSAFRF ATPVLTPALL  240
NFMFPTSHAM ALPPSFHSEP SPAAPSPPAP APAVHSVPVF DPAPLAFHYP HWSAPPPGFH  300
LAPAPAAPAD KSVVSTAPSS SALAPAPDNA SASHFASFFA PTPAPPAAFH LPDTTAPPPG  360
FHLAPAPAAP ATTPLTWQLM YQRHLALSSL QAQQSLRTLR PLLSMSPLGA AIMNTSSVSQ  420
PYGSSSSGAP EISEAELAGY RSLYRMLERE AAGGGLGDVR IDDPGTQGRS RKKKRRGEA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1471475KKKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00243.1.g00430.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3533334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.14e-13ethylene-responsive element binding factor 13