PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00227.1.g00520.1.sm.mkhc

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

EIL

Protein Properties

Length: 170aa MW: 19473.6 Da PI: 9.0192

Description

EIL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00227.1.g00520.1.sm.mkhc	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	EIN3	172.4	4.9e-53	38	148	1	112
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipe 79 eel krmwkd+++l+r+ker+++l ++a+++++k + ++qa rkkmsr DgiL+YMlk+mevcna+GfvYgiip+ Zpz_sc00227.1.g00520.1.sm.mkhc 38 EELAKRMWKDRVRLRRIKERQQRLA-LQKADLEKSKLKPVSNQAMRKKMSRVHDGILRYMLKMMEVCNARGFVYGIIPD 115 8*******************976.55556******************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 80 kgkpvegasdsLraWWkekvefdrngpaaisky 112 kgkpv+gasd++raWWkekv+fd+ngpaai+k+ Zpz_sc00227.1.g00520.1.sm.mkhc 116 KGKPVSGASDNIRAWWKEKVKFDKNGPAAIAKR 148 *****************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04873	2.0E-52	38	148	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence Send to blast
MEQLAMIASE LGDSSDLELE GIQNLNENDV SDEEIEPEEL AKRMWKDRVR LRRIKERQQR 60 LALQKADLEK SKLKPVSNQA MRKKMSRVHD GILRYMLKMM EVCNARGFVY GIIPDKGKPV 120 SGASDNIRAW WKEKVKFDKN GPAAIAKRLA VLVDPYELLE VFPGDMSSNV

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269\|PubMed:9215635, ECO:0000269\|PubMed:9851977}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00227.1.g00520.1.sm.mkhc

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004957192.1	2e-86	ETHYLENE INSENSITIVE 3-like 3 protein
Refseq	XP_004957193.1	2e-86	ETHYLENE INSENSITIVE 3-like 3 protein
Swissprot	O23116	1e-53	EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBL	A0A0A9DKK8	5e-85	A0A0A9DKK8_ARUDO; Uncharacterized protein
TrEMBL	K3ZRM9	4e-85	K3ZRM9_SETIT; Uncharacterized protein
STRING	Si029258m	7e-86	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3720	37	79

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G73730.1	4e-56	ETHYLENE-INSENSITIVE3-like 3

Publications ? help Back to Top
Frerigmann H,Gigolashvili T Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency. Front Plant Sci, 2014. 5: p. 626 [PMID:25426131] Zheng ZL,Zhang B,Leustek T Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing. Front Plant Sci, 2014. 5: p. 710 [PMID:25566284] Panda SK,Sunkar R Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling. Plant Signal Behav, 2015. 10(4): p. e1010916 [PMID:25912823] Wawrzyńska A,Sirko A EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor. Plant Sci., 2016. 253: p. 50-57 [PMID:27968996]