PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00143.1.g00040.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family TALE
Protein Properties Length: 482aa    MW: 53157.1 Da    PI: 8.0231
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00143.1.g00040.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox25.62.1e-083183551954
                                   HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
                      Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                                   Fe   ++yp+  ++  L++++gL+ +qV++WF N R +
  Zpz_sc00143.1.g00040.1.am.mk 318 FEHflHPYPNDVDKHILSRQTGLSRSQVSNWFINARVR 355
                                   554459******************************88 PP
2BELL987.7e-32179247472
                          BELL   4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                                   e +++ka+L+s+++eVd+rY++y+eq++ v  sFe+v+g g+a++Yt+lA +a+SrhFrcL+da++ q+
  Zpz_sc00143.1.g00040.1.am.mk 179 EFERRKARLMSMVQEVDRRYRRYREQMRLVELSFEVVTGAGAAQVYTRLARRAMSRHFRCLRDALVAQV 247
                                   7899**************************************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005749.9E-49104245IPR006563POX domain
PfamPF075261.2E-41109243IPR006563POX domain
PROSITE profilePS5007111.191296359IPR001356Homeobox domain
SMARTSM003891.9E-8299363IPR001356Homeobox domain
CDDcd000868.31E-11299360No hitNo description
SuperFamilySSF466891.54E-16300367IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.6E-27302365IPR009057Homeodomain-like
PfamPF059206.0E-17316355IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0009506Cellular Componentplasmodesma
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 482 aa     Download sequence    Send to blast
MAVHHQPHLL DFSTPPPAFD NNGLLTLHPV AGADMSATSG GGVLITGDTT PPPWPQAAVS  60
PLSLQFNYNH HHQPFTAAAP PAVAVSVAPH HELQVPAAAG SLQQPFHLIL RSSKYLGPVK  120
ELLGEFCSLE VEGECHATVD KRDSRKAAAG NKWDDAEAAV SSSWLWGSPS SISSMDLFEF  180
ERRKARLMSM VQEVDRRYRR YREQMRLVEL SFEVVTGAGA AQVYTRLARR AMSRHFRCLR  240
DALVAQVRAL KKAMGDRDGG VAPAGATKGD TPRLRVLDQC LRQRRAFQQP AGATESCPWR  300
PQRGLPERAV AVLRAWLFEH FLHPYPNDVD KHILSRQTGL SRSQVSNWFI NARVRLWKPM  360
IEDMYKEEMN LQQNPSDDAA AAIVKAERST ATMDLGGGGG GSYQHQQQLH ANTGNPADNN  420
MISTASRLQQ QQPFIASPPM MQHQQSSAGR LLLLEEEDQL PESVLPYTNL MGSQASLHDL  480
AG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A1e-14305362562Homeobox protein Meis2
3k2a_B1e-14305362562Homeobox protein Meis2
4xrm_A1e-14305362562Homeobox protein Meis2
4xrm_B1e-14305362562Homeobox protein Meis2
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPlays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). {ECO:0000269|PubMed:12244239, ECO:0000269|PubMed:17693535, ECO:0000269|PubMed:22786869}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00143.1.g00040.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004964302.11e-167homeobox protein BEL1 homolog
RefseqXP_004964303.11e-167homeobox protein BEL1 homolog
SwissprotQ388972e-90BEL1_ARATH; Homeobox protein BEL1 homolog
TrEMBLK3XWJ51e-166K3XWJ5_SETIT; Uncharacterized protein
STRINGSi006303m1e-167(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63983547
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.16e-85TALE family protein
Publications ? help Back to Top
  1. Yamada T,Sasaki Y,Hashimoto K,Nakajima K,Gasser CS
    CORONA, PHABULOSA and PHAVOLUTA collaborate with BELL1 to confine WUSCHEL expression to the nucellus in Arabidopsis ovules.
    Development, 2016. 143(3): p. 422-6
    [PMID:26700684]
  2. Lozano-Sotomayor P, et al.
    Altered expression of the bZIP transcription factor DRINK ME affects growth and reproductive development in Arabidopsis thaliana.
    Plant J., 2016. 88(3): p. 437-451
    [PMID:27402171]