PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00135.1.g00200.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Nin-like

Protein Properties

Length: 1171aa MW: 127494 Da PI: 8.1458

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00135.1.g00200.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	83.2	2.5e-26	943	992	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i +++++kyF++pi++AA+e++v+lTvLK++CR++G++RWPhRk+ksl Zpz_sc00135.1.g00200.1.am.mk 943 DHIGFNEIRKYFYMPITKAAREMNVGLTVLKKRCRELGVARWPHRKMKSL 992 6899********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02458	4.6E-53	104	528	IPR003480	Transferase
Gene3D	G3DSA:3.30.559.10	1.1E-50	104	311	IPR023213	Chloramphenicol acetyltransferase-like domain
Gene3D	G3DSA:3.30.559.10	4.0E-41	330	529	IPR023213	Chloramphenicol acetyltransferase-like domain
PROSITE profile	PS51519	17.7	930	1013	IPR003035	RWP-RK domain
Pfam	PF02042	2.8E-20	945	992	IPR003035	RWP-RK domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0016747	Molecular Function	transferase activity, transferring acyl groups other than amino-acyl groups

Sequence ? help Back to Top
Protein Sequence Length: 1171 aa Download sequence Send to blast
MLPWTKEGRL CTGNGVFRTG GGGGAGEWGP KSLDQMRRRG MRIRDRRRRK GMGGCSPEVP 60 GTARRREEQR RRRDLSPERR ATGHSARPHP PLELAAMVMV VSTTVTRKSQ SFVVPSEPAG 120 AETTLELSAI DRVPGLRHTV RSLHVFRPKA DVDPAARRSA AAASRPATVI REALSRALVD 180 YRPFAGRFIG SLFGGEACVA CTDEGAWFVE AAASCSLDDV NGLDYPLMIC EEELLPAPEE 240 GVDPTSIPVM MQVTEFSCGG FVVGLVAVHT LADGLGAAQF INAVSEFARG LDNLTVQPVW 300 ARDLIPIPPK PIPAGPPPSF KSFGFQHFVT DVTSDRVAQV KAEYFRTHGQ HCSAFDVAIA 360 KVWQARTRAL KYNREDKVHV CFFANTRHLL PALPKDGGFY GNCFYPVTVT AAVEDVVGAG 420 LLDVVKMIRD GKARLPLEFA KWASGDVKVD PYQLTFEHNV LFVSDWTRLG FFEVDYGWGA 480 PSHIVPFTYA DYMAVAVLGA LPAPTKGTRI MTQCVEQEHI KEFKDEMDVF STRVRRREIE 540 PGAERPWLGK PRTNERAGGR ASPPPATPPR SPACTYACAA CTLMPGSVSA AKNPLKSRRN 600 YHCDSARSLS HHRARPYCSL PQLILLRPSV VTLIAYVQFT PPLLVLIAGI AYIYKCGDSN 660 LPLPLLAGVV RSPTVELRFC ARRVLGRPCV AGLGIVKLGR RQWRWCRTPT STEETLIGTM 720 ELAVSLRCVH HLVPAGSEED DLLAVIAPPG PRNLEIRNSN LASSSDHVPL LLPVPDDSSS 780 SSAMILRNEE SHRLPVFPAA YDPSYYFDGL PPLPETAGGL DDPLMLQPFS DIDLDAFGGA 840 DEHIKASPPA DDIMIVVPAD RPYAAGQVAG VDGGNGDPKP VATVADCYHP PADSVDFGMA 900 AMRYGERSDQ ASSVAALPPP MPRLRHQVRM RSGTDPAGKT RLDHIGFNEI RKYFYMPITK 960 AAREMNVGLT VLKKRCRELG VARWPHRKMK SLKALILNVQ EMGKGMSPAA VQRELAALET 1020 YCALMEADPS IELTDQTKKL RQACFKESYK RRRAASFNGK IDHIYNFGHE LLQAAQGGKL 1080 TPQESSGGSA GRSRALEPPP PRACPAPAPA AADPRGHRRS PALPSGPTKA AEEVGEAAEE 1140 VDEEARRRED PGEAAAVEEV AAEEVAAVED S

Sequence ? help Back to Top

Protein Sequence Length: 1171 aa Download sequence Send to blast

MLPWTKEGRL CTGNGVFRTG GGGGAGEWGP KSLDQMRRRG MRIRDRRRRK GMGGCSPEVP  60
GTARRREEQR RRRDLSPERR ATGHSARPHP PLELAAMVMV VSTTVTRKSQ SFVVPSEPAG  120
AETTLELSAI DRVPGLRHTV RSLHVFRPKA DVDPAARRSA AAASRPATVI REALSRALVD  180
YRPFAGRFIG SLFGGEACVA CTDEGAWFVE AAASCSLDDV NGLDYPLMIC EEELLPAPEE  240
GVDPTSIPVM MQVTEFSCGG FVVGLVAVHT LADGLGAAQF INAVSEFARG LDNLTVQPVW  300
ARDLIPIPPK PIPAGPPPSF KSFGFQHFVT DVTSDRVAQV KAEYFRTHGQ HCSAFDVAIA  360
KVWQARTRAL KYNREDKVHV CFFANTRHLL PALPKDGGFY GNCFYPVTVT AAVEDVVGAG  420
LLDVVKMIRD GKARLPLEFA KWASGDVKVD PYQLTFEHNV LFVSDWTRLG FFEVDYGWGA  480
PSHIVPFTYA DYMAVAVLGA LPAPTKGTRI MTQCVEQEHI KEFKDEMDVF STRVRRREIE  540
PGAERPWLGK PRTNERAGGR ASPPPATPPR SPACTYACAA CTLMPGSVSA AKNPLKSRRN  600
YHCDSARSLS HHRARPYCSL PQLILLRPSV VTLIAYVQFT PPLLVLIAGI AYIYKCGDSN  660
LPLPLLAGVV RSPTVELRFC ARRVLGRPCV AGLGIVKLGR RQWRWCRTPT STEETLIGTM  720
ELAVSLRCVH HLVPAGSEED DLLAVIAPPG PRNLEIRNSN LASSSDHVPL LLPVPDDSSS  780
SSAMILRNEE SHRLPVFPAA YDPSYYFDGL PPLPETAGGL DDPLMLQPFS DIDLDAFGGA  840
DEHIKASPPA DDIMIVVPAD RPYAAGQVAG VDGGNGDPKP VATVADCYHP PADSVDFGMA  900
AMRYGERSDQ ASSVAALPPP MPRLRHQVRM RSGTDPAGKT RLDHIGFNEI RKYFYMPITK  960
AAREMNVGLT VLKKRCRELG VARWPHRKMK SLKALILNVQ EMGKGMSPAA VQRELAALET  1020
YCALMEADPS IELTDQTKKL RQACFKESYK RRRAASFNGK IDHIYNFGHE LLQAAQGGKL  1080
TPQESSGGSA GRSRALEPPP PRACPAPAPA AADPRGHRRS PALPSGPTKA AEEVGEAAEE  1140
VDEEARRRED PGEAAAVEEV AAEEVAAVED S

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5kjv_A	8e-30	108	524	6	421	Hydroxycinnamoyl transferase
5kjv_B	8e-30	108	524	6	421	Hydroxycinnamoyl transferase
5kjw_A	8e-30	108	524	6	421	Hydroxycinnamoyl transferase
5kjw_B	8e-30	108	524	6	421	Hydroxycinnamoyl transferase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00135.1.g00200.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53040.1	2e-35	RWP-RK domain-containing protein