PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00127.1.g00430.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 422aa    MW: 45690 Da    PI: 6.2639
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00127.1.g00430.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.9e-1984134256
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 
                                   +++GVr+++ +grW+AeIrdp     +  +r +lg+f taeeAa a++ a  +l+g+
  Zpz_sc00127.1.g00430.1.sm.mk  84 HFRGVRQRP-WGRWAAEIRDP-----HhrRRLWLGTFNTAEEAAVAYDSASIRLHGA 134
                                   69*******.**********7.....447*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.35484141IPR001471AP2/ERF domain
PfamPF008473.2E-1284133IPR001471AP2/ERF domain
CDDcd000186.01E-3284143No hitNo description
SMARTSM003801.4E-3284147IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-2984142IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-2184142IPR016177DNA-binding domain
PRINTSPR003674.4E-108596IPR001471AP2/ERF domain
PRINTSPR003674.4E-10107123IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    Send to blast
MGPNPSLDTL AAVAATATAS ERRRARVVRI LVHDEDATDS SSDEDEEPQP PPRQLRRARG  60
GGGGRRSGVK RRVMEALGPR PDVHFRGVRQ RPWGRWAAEI RDPHHRRRLW LGTFNTAEEA  120
AVAYDSASIR LHGAGATTNF PTARYLPPLE PAEPIVSLSP APGTVITLPP VPVNPTVPLQ  180
LEKDVGSCED QGEVGATTLV EVPVHQQIVS LTPAPGTLIT LPPVLVNPTV PQQVMDEVGS  240
CEDQEELGAT SLVEVPGRQQ IVSLTHASRL PQTLPHTLPP VPVNPTVPQQ VMKEVGSCED  300
QEEVGTTSLV EVPVHQQIVS LPGLLITLLP VPGNPTVPLL VMKEVGSCED QEEVGATSLV  360
EMPVHQQMPL RETIAGHALR EQQARWAHAS HRYHTWAMPT SCAALCPVGR TTFHKHVIVL  420
HN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-2084141563ATERF1
3gcc_A7e-2084141563ATERF1
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00127.1.g00430.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP115732835
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03800.11e-26ERF domain protein 10