PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc00084.1.g00190.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 526aa MW: 55151.2 Da PI: 7.9166 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.3 | 3.9e-18 | 346 | 396 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +gr++AeIrdp r + ++lg+f++ae Aa+a++aa+++l+g+ Zpz_sc00084.1.g00190.1.am.mk 346 KYRGVRRRP-SGRYAAEIRDP---A-RkTPIWLGTFDSAEAAARAYDAAARSLRGA 396 8********.7*********8...2.35*************************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 21.628 | 346 | 403 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.3E-27 | 346 | 404 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.9E-11 | 346 | 395 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 9.83E-14 | 346 | 402 | No hit | No description |
SuperFamily | SSF54171 | 5.95E-20 | 346 | 404 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 5.1E-31 | 346 | 409 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.1E-7 | 347 | 358 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.1E-7 | 369 | 385 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 526 aa Download sequence Send to blast |
MNAQYKGDKY PSKGVRFKPV EKEIGDVLLE ELDHRLLLPP QQIQPSSDRS EAALSNPGSK 60 QLKCEECGTQ TNAKETMLAE HGPKLNRQGK RKHFVAEERR RWEQDRAEAN DASGGVKASE 120 RGEGGEKKEA VVAWPGGGGE GDRCGWRKMD EVVRRRTDSL ALSAAGGHVA GVSHLVSAAG 180 AGPGSPPPLE IGAAEDWGGA TERCVATTIP SAVQPRDVAG AAIRQAPPTE HGTMRRAQPP 240 LLLRGGARPA QVREYAVSHY CPSGWRCGHH RHTELSAAPH PAVEESEKSP QARDAPGECH 300 DSAGVRSRAA DPETWTAAAE GRRGGRMPRA RPPPVPAARE AGVEVKYRGV RRRPSGRYAA 360 EIRDPARKTP IWLGTFDSAE AAARAYDAAA RSLRGAAART NFSASASAQV AAPSPAIPPA 420 ATVAAAATSS HSSTVESWSG GGGGGRIGAP GATIAGATRA APAAEEDCRS YCGSSSSVLC 480 DDGVSSAGDE AVAPPTRSSP LPFDLNVADP AAPDEMDWRC DTILHL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 2e-16 | 346 | 402 | 14 | 71 | Ethylene-responsive transcription factor ERF096 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc00084.1.g00190.1.am.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP44940 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53170.1 | 1e-11 | ethylene response factor 8 |