PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00004.1.g01590.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 563aa    MW: 61098.8 Da    PI: 10.4305
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00004.1.g01590.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY65.11.1e-20386447259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59 
                                   +Dg++WrKYG K++++++fpr YYrCt++   +Cp++k+v+++ ++d+ +  +tY +eH ++
  Zpz_sc00004.1.g01590.1.am.mk 386 NDGHQWRKYGEKKINNTNFPRYYYRCTYKdnmNCPATKQVQQKdSSDTPLYAVTYYNEHSCN 447
                                   8***************************99999*******875167999**********997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-22372447IPR003657WRKY domain
SuperFamilySSF1182902.09E-21380447IPR003657WRKY domain
PROSITE profilePS5081116.627380449IPR003657WRKY domain
SMARTSM007742.7E-31385448IPR003657WRKY domain
PfamPF031067.4E-24386446IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 563 aa     Download sequence    Send to blast
MGTSFSALRH VTAGDRRPSQ PRACLSLGPQ RPRYRADAAA ATFEAPQAVL RPSLGRRCRA  60
LAAPPLASNA GGREKPGPNS RSAAASARLP SAGPRANKYQ DPAGFHHYQL ANHVVYSDRA  120
SRPASEVSLA SNPNFAVGVF LAAGGSSQKS APSSSSSRRF FKILLTSPRE MRCPPMAPEL  180
RVSTTTKWGP AVEPPRQGRF LPAAPCCMPL DSREASTDHG AGKENEASGE INDRLLRAVN  240
KYSTGDTAPE TTPDPFFLWS LGPQKKKKRA PKKARPKSSV RGGHVTAMRR PGDWSDGREA  300
VRSISPRDLA PAGRLVLSVS SSLSPSPSAF LDFFIRPEGT NNVSGAELAP ATHESEVLLP  360
TCRWLQRSSA RKEKRMKQVD SFAPHNDGHQ WRKYGEKKIN NTNFPRYYYR CTYKDNMNCP  420
ATKQVQQKDS SDTPLYAVTY YNEHSCNSAY LSLFPSEFQL QTSSGKAISI CFDSSAAPQE  480
PVASACSPSS SAAMPAAMRR GTPPETKRPP APVLRRSETY PWGAGAVEQR PPASCGTERL  540
GAAVPVEVVD AGRFGEIRFF HFL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-13386446968OsWRKY45
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1265276KKKRAPKKARPK
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00004.1.g01590.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKU0586231e-119KU058623.1 UNVERIFIED: Panicum miliaceum WRKY6-like gene, complete sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP203235100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.21e-15WRKY family protein