PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00001.1.g00700.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 497aa    MW: 53716.9 Da    PI: 7.9731
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00001.1.g00700.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.7e-18295344255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   +ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  Zpz_sc00001.1.g00700.1.am.mk 295 QYKGVRMRS-WGSWVSEIRAP---NQKRRIWLGSYATPEAAARAYDAALLCLKG 344
                                   69****998.**********9...336************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.7E-29294354IPR001471AP2/ERF domain
PfamPF008473.2E-11295344IPR001471AP2/ERF domain
PROSITE profilePS5103222.181295352IPR001471AP2/ERF domain
SMARTSM003806.6E-36295358IPR001471AP2/ERF domain
CDDcd000184.16E-17295351No hitNo description
SuperFamilySSF541713.27E-19295353IPR016177DNA-binding domain
PRINTSPR003671.8E-7296307IPR001471AP2/ERF domain
PRINTSPR003671.8E-7318334IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 497 aa     Download sequence    Send to blast
MNESGCALAW RRGVTDQEAC FPCLEQLSKI SRFLWRKTKG KKGDEETSPV SPTKHWFCTH  60
CASARASFRA KLCEAPSQPA HASALRNETV GMCEREVKRP ASEPSCTYAS FRLFRSAQKE  120
EQVARPYVSV PILSQTNPRQ KGMFSAAILV FPVGIVSHQI TTDESAATTH DHEPNDTWST  180
ERYYYITYLP WGAKLSLNDS RHRFRFLSTP ASLSHSSLAG DSSPLQKPRH LLTHRPLPSQ  240
RNRIANAEED LSSRTDAVMV KNPSSAIAAA TAFTDEKARA PESAGGGKHQ VAARQYKGVR  300
MRSWGSWVSE IRAPNQKRRI WLGSYATPEA AARAYDAALL CLKGSDAVLN FPSSSPSSSH  360
SSSSSLNVGD RGRSQSDQLV AGCMSPRSIQ RAAAAAAAMF EAGVEDRCSS SAGATTATSA  420
TVSATDHGHE HAAPCSSSAA ASTGSSVQGE ELWTDLLDAL ASPNCMDLMA AGGAAPFSST  480
WEEPEDDGEM MRLWSFC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-112953521472Ethylene-responsive transcription factor ERF096
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00001.1.g00700.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7276603e-75KJ727660.1 Zea mays clone pUT5587 AP2-EREBP transcription factor (EREB173) gene, partial cds.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108303040
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.11e-19ERF family protein