PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02154.1.g00030.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 482aa    MW: 51604.7 Da    PI: 8.3746
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02154.1.g00030.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.4e-18310360155
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   + ykGVr++   grWv+e+r+p   g ++r++lg+f tae+Aa+a++ a+++l+g
  Zmw_sc02154.1.g00030.1.am.mk 310 PVYKGVRRRN-PGRWVCEVREP--HG-KQRIWLGTFETAEMAARAHDVAALALRG 360
                                   68*****887.9******9996..33.5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.6E-13310360IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.4E-29311370IPR001471AP2/ERF domain
SMARTSM003801.4E-26311374IPR001471AP2/ERF domain
PROSITE profilePS5103221.694311368IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-20311369IPR016177DNA-binding domain
CDDcd000188.83E-27312370No hitNo description
PRINTSPR003679.4E-8312323IPR001471AP2/ERF domain
PRINTSPR003679.4E-8334350IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009631Biological Processcold acclimation
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 482 aa     Download sequence    Send to blast
MMRAMPKTLV GGGKLGKAES ARDGAEDRDG QPNSVDIAPK FSDDRVENNS NSVAGARLWL  60
HPLAAADLGA TCDVNRQTNG PVYPSGHGES PSGPSPLAID LEPQRPGPMK LPLNRDAGRI  120
LCAALDASFA LVRRVRRAED PIPAITAVAE ERERERERER ERERAPGWGE AQAGGRRPMT  180
PRCARPNRSS APRAPAGSDP TNLRSPLARE PVPRVLDPSS RANLAGISGA ATRRSSAHGH  240
VALDAPSTLP SRRSIRSIAM DVGALSSDYS SGTPSPVGGS DGSSASYMTV SSAPPKRRAG  300
RTKFKETRHP VYKGVRRRNP GRWVCEVREP HGKQRIWLGT FETAEMAARA HDVAALALRG  360
LGACLNFADS PRLLRVPPLG AGHDEIRRAA AEAAEQFRPA FSQDQGNVAV EEPITTLPDL  420
LSSETQSTDR HPYCVVDDKF DLGMQGYLDM AQGMLIDPPP IEGSSGNGGD DDDGGEVKLW  480
SY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1153163RERERERERER
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00644PBMTransfer from LOC_Os02g45450Download
Motif logo
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19636261